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Cluster: HRGMv2_2312_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_1 HRGMv2_2312_1_136 144130 145464 - 2.A.66.1.7
CAZyme HRGMv2_2312_1 HRGMv2_2312_1_137 145615 148302 - PL26
TF HRGMv2_2312_1 HRGMv2_2312_1_138 148329 149846 - HTH_AraC | HTH_AraC
TC HRGMv2_2312_1 HRGMv2_2312_1_139 149843 151633 - 8.A.59.2.1
TC HRGMv2_2312_1 HRGMv2_2312_1_140 151655 152491 - 3.A.1.1.42
TC HRGMv2_2312_1 HRGMv2_2312_1_141 152488 153354 - 3.A.1.1.7
STP HRGMv2_2312_1 HRGMv2_2312_1_142 153376 154788 - SBP_bac_1
TC HRGMv2_2312_1 HRGMv2_2312_1_143 154942 156708 - 3.A.1.106.3
TC HRGMv2_2312_1 HRGMv2_2312_1_144 156701 158521 - 3.A.1.106.3
TC HRGMv2_2312_1 HRGMv2_2312_1_145 158656 160392 - 2.A.114.1.3
Gene ID: HRGMv2_2312_1_136
Type: TC
Location: 144130 - 145464 (-)
Gene ID: HRGMv2_2312_1_137
Type: CAZyme
Location: 145615 - 148302 (-)
Gene ID: HRGMv2_2312_1_138
Type: TF
Location: 148329 - 149846 (-)
Gene ID: HRGMv2_2312_1_139
Type: TC
Location: 149843 - 151633 (-)
Gene ID: HRGMv2_2312_1_140
Type: TC
Location: 151655 - 152491 (-)
Gene ID: HRGMv2_2312_1_141
Type: TC
Location: 152488 - 153354 (-)
Gene ID: HRGMv2_2312_1_142
Type: STP
Location: 153376 - 154788 (-)
Gene ID: HRGMv2_2312_1_143
Type: TC
Location: 154942 - 156708 (-)
Gene ID: HRGMv2_2312_1_144
Type: TC
Location: 156701 - 158521 (-)
Gene ID: HRGMv2_2312_1_145
Type: TC
Location: 158656 - 160392 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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