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Cluster: HRGMv2_2312_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_8 HRGMv2_2312_8_13 18581 19126 - 2.A.88.3.1
sulfatase HRGMv2_2312_8 HRGMv2_2312_8_14 19542 22319 + S1_97
CAZyme HRGMv2_2312_8 HRGMv2_2312_8_15 22349 24343 + GH67
CAZyme HRGMv2_2312_8 HRGMv2_2312_8_16 24395 27865 + GH2
TF HRGMv2_2312_8 HRGMv2_2312_8_17 27878 28837 - HTH_AraC | HTH_AraC
TC HRGMv2_2312_8 HRGMv2_2312_8_18 29134 30081 + 3.A.1.1.10
TC HRGMv2_2312_8 HRGMv2_2312_8_19 30081 30953 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_2312_8 HRGMv2_2312_8_20 31024 32739 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2312_8 HRGMv2_2312_8_21 32770 33855 + 9.B.146.1.3
pfam HRGMv2_2312_8 HRGMv2_2312_8_22 33892 34395 + GreA_GreB | GreA_GreB_N
peptidase HRGMv2_2312_8 HRGMv2_2312_8_23 34398 35897 + G05.UPW
CAZyme HRGMv2_2312_8 HRGMv2_2312_8_24 35949 36770 + GT2
Gene ID: HRGMv2_2312_8_13
Type: TC
Location: 18581 - 19126 (-)
Gene ID: HRGMv2_2312_8_14
Type: sulfatase
Location: 19542 - 22319 (+)
Gene ID: HRGMv2_2312_8_15
Type: CAZyme
Location: 22349 - 24343 (+)
Gene ID: HRGMv2_2312_8_16
Type: CAZyme
Location: 24395 - 27865 (+)
Gene ID: HRGMv2_2312_8_17
Type: TF
Location: 27878 - 28837 (-)
Gene ID: HRGMv2_2312_8_18
Type: TC
Location: 29134 - 30081 (+)
Gene ID: HRGMv2_2312_8_19
Type: TC
Location: 30081 - 30953 (+)
Gene ID: HRGMv2_2312_8_20
Type:
Location: 31024 - 32739 (+)
Gene ID: HRGMv2_2312_8_21
Type: TC
Location: 32770 - 33855 (+)
Gene ID: HRGMv2_2312_8_22
Type: pfam
Location: 33892 - 34395 (+)
Gene ID: HRGMv2_2312_8_23
Type: peptidase
Location: 34398 - 35897 (+)
Gene ID: HRGMv2_2312_8_24
Type: CAZyme
Location: 35949 - 36770 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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