Cluster: HRGMv2_2312_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2312
- CGC Family ID: CGCFAM_00114
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2312_6 | HRGMv2_2312_6_85 | 87896 | 88666 | + | 3.A.1.16.4 |
| pfam | HRGMv2_2312_6 | HRGMv2_2312_6_86 | 88653 | 89465 | + | BPD_transp_1 |
| TC | HRGMv2_2312_6 | HRGMv2_2312_6_87 | 89695 | 90570 | - | 1.A.23.2.1 |
| CAZyme | HRGMv2_2312_6 | HRGMv2_2312_6_88 | 90567 | 92810 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2312_6_85
Type: TC
Location: 87896 - 88666 (+)
Type: TC
Location: 87896 - 88666 (+)
Gene ID: HRGMv2_2312_6_86
Type: pfam
Location: 88653 - 89465 (+)
Type: pfam
Location: 88653 - 89465 (+)
Gene ID: HRGMv2_2312_6_87
Type: TC
Location: 89695 - 90570 (-)
Type: TC
Location: 89695 - 90570 (-)
Gene ID: HRGMv2_2312_6_88
Type: CAZyme
Location: 90567 - 92810 (-)
Type: CAZyme
Location: 90567 - 92810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.