Cluster: HRGMv2_2308_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2308
- CGC Family ID: CGCFAM_04267
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2308_14 | HRGMv2_2308_14_23 | 26746 | 31587 | - | CBM32 | CBM32 | CBM32 | GH20 |
| pfam | HRGMv2_2308_14 | HRGMv2_2308_14_24 | 31822 | 32943 | + | MFS_1 |
| TC | HRGMv2_2308_14 | HRGMv2_2308_14_25 | 32996 | 34027 | - | 2.A.98.1.4 |
| STP | HRGMv2_2308_14 | HRGMv2_2308_14_26 | 34038 | 34937 | - | Pyr_redox_2 |
| TF | HRGMv2_2308_14 | HRGMv2_2308_14_27 | 35084 | 35977 | + | HTH_1 |
| TC | HRGMv2_2308_14 | HRGMv2_2308_14_28 | 35974 | 37584 | - | 3.A.1.106.1 |
Gene ID: HRGMv2_2308_14_23
Type: CAZyme
Location: 26746 - 31587 (-)
Type: CAZyme
Location: 26746 - 31587 (-)
Gene ID: HRGMv2_2308_14_24
Type: pfam
Location: 31822 - 32943 (+)
Type: pfam
Location: 31822 - 32943 (+)
Gene ID: HRGMv2_2308_14_25
Type: TC
Location: 32996 - 34027 (-)
Type: TC
Location: 32996 - 34027 (-)
Gene ID: HRGMv2_2308_14_26
Type: STP
Location: 34038 - 34937 (-)
Type: STP
Location: 34038 - 34937 (-)
Gene ID: HRGMv2_2308_14_27
Type: TF
Location: 35084 - 35977 (+)
Type: TF
Location: 35084 - 35977 (+)
Gene ID: HRGMv2_2308_14_28
Type: TC
Location: 35974 - 37584 (-)
Type: TC
Location: 35974 - 37584 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.