Cluster: HRGMv2_2308_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2308
- CGC Family ID: CGCFAM_02337
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2308_4 | HRGMv2_2308_4_14 | 14722 | 15291 | - | 3.A.11.1.1 |
| pfam | HRGMv2_2308_4 | HRGMv2_2308_4_15 | 15380 | 15811 | - | DMT_YdcZ |
| CAZyme | HRGMv2_2308_4 | HRGMv2_2308_4_16 | 15918 | 17180 | - | CE4 |
| pfam | HRGMv2_2308_4 | HRGMv2_2308_4_17 | 17198 | 19198 | - | DUF6449 |
| TC | HRGMv2_2308_4 | HRGMv2_2308_4_18 | 19173 | 20075 | - | 3.A.1.132.6 |
Gene ID: HRGMv2_2308_4_14
Type: TC
Location: 14722 - 15291 (-)
Type: TC
Location: 14722 - 15291 (-)
Gene ID: HRGMv2_2308_4_15
Type: pfam
Location: 15380 - 15811 (-)
Type: pfam
Location: 15380 - 15811 (-)
Gene ID: HRGMv2_2308_4_16
Type: CAZyme
Location: 15918 - 17180 (-)
Type: CAZyme
Location: 15918 - 17180 (-)
Gene ID: HRGMv2_2308_4_17
Type: pfam
Location: 17198 - 19198 (-)
Type: pfam
Location: 17198 - 19198 (-)
Gene ID: HRGMv2_2308_4_18
Type: TC
Location: 19173 - 20075 (-)
Type: TC
Location: 19173 - 20075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.