Cluster: HRGMv2_2308_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2308
- CGC Family ID: CGCFAM_06116
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2308_48 | HRGMv2_2308_48_1 | 73 | 627 | - | 3.A.1.25.3 |
| NULL(UNKNOWN) | HRGMv2_2308_48 | HRGMv2_2308_48_2 | 1372 | 3879 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2308_48 | HRGMv2_2308_48_3 | 3954 | 5888 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2308_48 | HRGMv2_2308_48_4 | 5910 | 6563 | + | Methyltransf_4 | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| pfam | HRGMv2_2308_48 | HRGMv2_2308_48_5 | 6758 | 7027 | + | Thioredoxin | HyaE | Thioredoxin_9 |
| TC | HRGMv2_2308_48 | HRGMv2_2308_48_6 | 7156 | 8037 | + | 2.A.115.1.1 |
Gene ID: HRGMv2_2308_48_1
Type: TC
Location: 73 - 627 (-)
Type: TC
Location: 73 - 627 (-)
Gene ID: HRGMv2_2308_48_2
Type:
Location: 1372 - 3879 (+)
Type:
Location: 1372 - 3879 (+)
Gene ID: HRGMv2_2308_48_3
Type: CAZyme
Location: 3954 - 5888 (+)
Type: CAZyme
Location: 3954 - 5888 (+)
Gene ID: HRGMv2_2308_48_4
Type: pfam
Location: 5910 - 6563 (+)
Type: pfam
Location: 5910 - 6563 (+)
Gene ID: HRGMv2_2308_48_5
Type: pfam
Location: 6758 - 7027 (+)
Type: pfam
Location: 6758 - 7027 (+)
Gene ID: HRGMv2_2308_48_6
Type: TC
Location: 7156 - 8037 (+)
Type: TC
Location: 7156 - 8037 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.