Cluster: HRGMv2_2308_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2308_44 | HRGMv2_2308_44_3 | 947 | 1804 | + | 3.A.1.106.14 |
| pfam | HRGMv2_2308_44 | HRGMv2_2308_44_4 | 1797 | 2183 | + | NTP_transf_5 |
| pfam | HRGMv2_2308_44 | HRGMv2_2308_44_5 | 2283 | 2969 | + | NTP_transf_5 |
| CAZyme | HRGMv2_2308_44 | HRGMv2_2308_44_6 | 3115 | 7749 | + | CBM32 | GH84 |
| NULL(UNKNOWN) | HRGMv2_2308_44 | HRGMv2_2308_44_7 | 7861 | 9069 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2308_44 | HRGMv2_2308_44_8 | 9073 | 9651 | + | 9.B.33.1.2 |
Gene ID: HRGMv2_2308_44_3
Type: TC
Location: 947 - 1804 (+)
Type: TC
Location: 947 - 1804 (+)
Gene ID: HRGMv2_2308_44_4
Type: pfam
Location: 1797 - 2183 (+)
Type: pfam
Location: 1797 - 2183 (+)
Gene ID: HRGMv2_2308_44_5
Type: pfam
Location: 2283 - 2969 (+)
Type: pfam
Location: 2283 - 2969 (+)
Gene ID: HRGMv2_2308_44_6
Type: CAZyme
Location: 3115 - 7749 (+)
Type: CAZyme
Location: 3115 - 7749 (+)
Gene ID: HRGMv2_2308_44_7
Type:
Location: 7861 - 9069 (+)
Type:
Location: 7861 - 9069 (+)
Gene ID: HRGMv2_2308_44_8
Type: TC
Location: 9073 - 9651 (+)
Type: TC
Location: 9073 - 9651 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.