Cluster: HRGMv2_2308_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2308_35 | HRGMv2_2308_35_2 | 1788 | 3620 | - | 3.D.1.5.1 |
| pfam | HRGMv2_2308_35 | HRGMv2_2308_35_3 | 3887 | 5053 | + | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| pfam | HRGMv2_2308_35 | HRGMv2_2308_35_4 | 5076 | 6566 | + | GalP_UDP_transf | GalP_UDP_tr_C |
| CAZyme | HRGMv2_2308_35 | HRGMv2_2308_35_5 | 6774 | 13883 | + | GH2 | GH2 |
Gene ID: HRGMv2_2308_35_2
Type: TC
Location: 1788 - 3620 (-)
Type: TC
Location: 1788 - 3620 (-)
Gene ID: HRGMv2_2308_35_3
Type: pfam
Location: 3887 - 5053 (+)
Type: pfam
Location: 3887 - 5053 (+)
Gene ID: HRGMv2_2308_35_4
Type: pfam
Location: 5076 - 6566 (+)
Type: pfam
Location: 5076 - 6566 (+)
Gene ID: HRGMv2_2308_35_5
Type: CAZyme
Location: 6774 - 13883 (+)
Type: CAZyme
Location: 6774 - 13883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.