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Cluster: HRGMv2_2308_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2308_34 HRGMv2_2308_34_5 2599 3450 + 3.A.1.25.4
TC HRGMv2_2308_34 HRGMv2_2308_34_6 3435 4277 + 3.A.1.26.7
TC HRGMv2_2308_34 HRGMv2_2308_34_7 4274 5098 + 3.A.1.25.4
pfam HRGMv2_2308_34 HRGMv2_2308_34_8 5184 5927 + PseudoU_synth_1 | PseudoU_synth_1
pfam HRGMv2_2308_34 HRGMv2_2308_34_9 6204 7163 + RVT_1
TC HRGMv2_2308_34 HRGMv2_2308_34_10 7172 9280 + 3.A.7.7.1
sulfatase HRGMv2_2308_34 HRGMv2_2308_34_11 9409 10140 + S1_9
CAZyme HRGMv2_2308_34 HRGMv2_2308_34_12 10152 11258 + CE9
pfam HRGMv2_2308_34 HRGMv2_2308_34_13 11626 12849 + tRNA-synt_1b | S4 | SYY_C-terminal
TC HRGMv2_2308_34 HRGMv2_2308_34_14 12985 15354 + 3.A.3.23.2
Gene ID: HRGMv2_2308_34_5
Type: TC
Location: 2599 - 3450 (+)
Gene ID: HRGMv2_2308_34_6
Type: TC
Location: 3435 - 4277 (+)
Gene ID: HRGMv2_2308_34_7
Type: TC
Location: 4274 - 5098 (+)
Gene ID: HRGMv2_2308_34_8
Type: pfam
Location: 5184 - 5927 (+)
Gene ID: HRGMv2_2308_34_9
Type: pfam
Location: 6204 - 7163 (+)
Gene ID: HRGMv2_2308_34_10
Type: TC
Location: 7172 - 9280 (+)
Gene ID: HRGMv2_2308_34_11
Type: sulfatase
Location: 9409 - 10140 (+)
Gene ID: HRGMv2_2308_34_12
Type: CAZyme
Location: 10152 - 11258 (+)
Gene ID: HRGMv2_2308_34_13
Type: pfam
Location: 11626 - 12849 (+)
Gene ID: HRGMv2_2308_34_14
Type: TC
Location: 12985 - 15354 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Faecalimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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