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Cluster: HRGMv2_2308_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2308_28 HRGMv2_2308_28_9 10174 10734 + 2.A.2.3.4
TC HRGMv2_2308_28 HRGMv2_2308_28_10 10756 11550 + 2.A.2.3.9
CAZyme HRGMv2_2308_28 HRGMv2_2308_28_11 11563 14034 + GH2
peptidase HRGMv2_2308_28 HRGMv2_2308_28_12 14175 15785 + M38.UNW
TC HRGMv2_2308_28 HRGMv2_2308_28_13 15778 16695 + 2.A.7.3.65
TF HRGMv2_2308_28 HRGMv2_2308_28_14 16683 18287 + HTH_AraC
TC HRGMv2_2308_28 HRGMv2_2308_28_15 18268 19995 + 8.A.59.2.1
STP HRGMv2_2308_28 HRGMv2_2308_28_16 19982 20950 + Peripla_BP_1
STP HRGMv2_2308_28 HRGMv2_2308_28_17 21056 22180 + Peripla_BP_1 | Peripla_BP_3
TC HRGMv2_2308_28 HRGMv2_2308_28_18 22275 23774 + 3.A.1.2.3
TC HRGMv2_2308_28 HRGMv2_2308_28_19 23790 24860 + 3.A.1.2.3
Gene ID: HRGMv2_2308_28_9
Type: TC
Location: 10174 - 10734 (+)
Gene ID: HRGMv2_2308_28_10
Type: TC
Location: 10756 - 11550 (+)
Gene ID: HRGMv2_2308_28_11
Type: CAZyme
Location: 11563 - 14034 (+)
Gene ID: HRGMv2_2308_28_12
Type: peptidase
Location: 14175 - 15785 (+)
Gene ID: HRGMv2_2308_28_13
Type: TC
Location: 15778 - 16695 (+)
Gene ID: HRGMv2_2308_28_14
Type: TF
Location: 16683 - 18287 (+)
Gene ID: HRGMv2_2308_28_15
Type: TC
Location: 18268 - 19995 (+)
Gene ID: HRGMv2_2308_28_16
Type: STP
Location: 19982 - 20950 (+)
Gene ID: HRGMv2_2308_28_17
Type: STP
Location: 21056 - 22180 (+)
Gene ID: HRGMv2_2308_28_18
Type: TC
Location: 22275 - 23774 (+)
Gene ID: HRGMv2_2308_28_19
Type: TC
Location: 23790 - 24860 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Faecalimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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