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Cluster: HRGMv2_2307_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2307_28 HRGMv2_2307_28_8 4441 5286 - 1.E.12.1.3
TC HRGMv2_2307_28 HRGMv2_2307_28_9 5624 6361 - 3.A.1.3.28
pfam HRGMv2_2307_28 HRGMv2_2307_28_10 6354 7178 - DUF169
TC HRGMv2_2307_28 HRGMv2_2307_28_11 7190 7855 - 3.A.1.3.13
TC HRGMv2_2307_28 HRGMv2_2307_28_12 7901 8722 - 3.A.1.3.14
TC HRGMv2_2307_28 HRGMv2_2307_28_13 9452 10333 - 2.A.115.1.1
pfam HRGMv2_2307_28 HRGMv2_2307_28_14 10462 10731 - Thioredoxin | Thioredoxin_9
pfam HRGMv2_2307_28 HRGMv2_2307_28_15 10927 11580 - Methyltransf_4 | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_2307_28 HRGMv2_2307_28_16 11602 13536 - CBM48 | GH13_9
Gene ID: HRGMv2_2307_28_8
Type: TC
Location: 4441 - 5286 (-)
Gene ID: HRGMv2_2307_28_9
Type: TC
Location: 5624 - 6361 (-)
Gene ID: HRGMv2_2307_28_10
Type: pfam
Location: 6354 - 7178 (-)
Gene ID: HRGMv2_2307_28_11
Type: TC
Location: 7190 - 7855 (-)
Gene ID: HRGMv2_2307_28_12
Type: TC
Location: 7901 - 8722 (-)
Gene ID: HRGMv2_2307_28_13
Type: TC
Location: 9452 - 10333 (-)
Gene ID: HRGMv2_2307_28_14
Type: pfam
Location: 10462 - 10731 (-)
Gene ID: HRGMv2_2307_28_15
Type: pfam
Location: 10927 - 11580 (-)
Gene ID: HRGMv2_2307_28_16
Type: CAZyme
Location: 11602 - 13536 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Faecalimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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