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Cluster: HRGMv2_2307_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2307_19 HRGMv2_2307_19_8 3750 4211 + 9.A.11.1.1
pfam HRGMv2_2307_19 HRGMv2_2307_19_9 4213 5217 + SpoVAD
pfam HRGMv2_2307_19 HRGMv2_2307_19_10 5229 5585 + SpoVAC_SpoVAEB
TC HRGMv2_2307_19 HRGMv2_2307_19_11 5673 7307 + 2.A.58.2.2
pfam HRGMv2_2307_19 HRGMv2_2307_19_12 7382 8359 + LytR_cpsA_psr
NULL(UNKNOWN) HRGMv2_2307_19 HRGMv2_2307_19_13 8411 9013 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2307_19 HRGMv2_2307_19_14 9144 9830 + 8.A.3.2.3
pfam HRGMv2_2307_19 HRGMv2_2307_19_15 9838 10563 + CpsB_CapC
TC HRGMv2_2307_19 HRGMv2_2307_19_16 10566 11243 + 8.A.3.2.3
TC HRGMv2_2307_19 HRGMv2_2307_19_17 11287 13149 + 9.B.18.2.1
TC HRGMv2_2307_19 HRGMv2_2307_19_18 13154 13765 + 9.B.18.1.3
pfam HRGMv2_2307_19 HRGMv2_2307_19_19 13773 14606 + HpcH_HpaI
pfam HRGMv2_2307_19 HRGMv2_2307_19_20 14608 15501 + 2-Hacid_dh | AdoHcyase_NAD | AlaDh_PNT_C | 2-Hacid_dh_C
CAZyme HRGMv2_2307_19 HRGMv2_2307_19_21 15504 16622 + GT4
CAZyme HRGMv2_2307_19 HRGMv2_2307_19_22 16609 17433 + GT2
pfam HRGMv2_2307_19 HRGMv2_2307_19_23 17436 18548 + EpsG
CAZyme HRGMv2_2307_19 HRGMv2_2307_19_24 18592 19242 + GT2
Gene ID: HRGMv2_2307_19_8
Type: TC
Location: 3750 - 4211 (+)
Gene ID: HRGMv2_2307_19_9
Type: pfam
Location: 4213 - 5217 (+)
Gene ID: HRGMv2_2307_19_10
Type: pfam
Location: 5229 - 5585 (+)
Gene ID: HRGMv2_2307_19_11
Type: TC
Location: 5673 - 7307 (+)
Gene ID: HRGMv2_2307_19_12
Type: pfam
Location: 7382 - 8359 (+)
Gene ID: HRGMv2_2307_19_13
Type:
Location: 8411 - 9013 (+)
Gene ID: HRGMv2_2307_19_14
Type: TC
Location: 9144 - 9830 (+)
Gene ID: HRGMv2_2307_19_15
Type: pfam
Location: 9838 - 10563 (+)
Gene ID: HRGMv2_2307_19_16
Type: TC
Location: 10566 - 11243 (+)
Gene ID: HRGMv2_2307_19_17
Type: TC
Location: 11287 - 13149 (+)
Gene ID: HRGMv2_2307_19_18
Type: TC
Location: 13154 - 13765 (+)
Gene ID: HRGMv2_2307_19_19
Type: pfam
Location: 13773 - 14606 (+)
Gene ID: HRGMv2_2307_19_20
Type: pfam
Location: 14608 - 15501 (+)
Gene ID: HRGMv2_2307_19_21
Type: CAZyme
Location: 15504 - 16622 (+)
Gene ID: HRGMv2_2307_19_22
Type: CAZyme
Location: 16609 - 17433 (+)
Gene ID: HRGMv2_2307_19_23
Type: pfam
Location: 17436 - 18548 (+)
Gene ID: HRGMv2_2307_19_24
Type: CAZyme
Location: 18592 - 19242 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Faecalimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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