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Cluster: HRGMv2_2307_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2307_12 HRGMv2_2307_12_10 9117 10355 - 2.A.1.24.4
pfam HRGMv2_2307_12 HRGMv2_2307_12_11 10372 11160 - Zn_dep_PLPC
TC HRGMv2_2307_12 HRGMv2_2307_12_12 11231 12472 - 5.A.1.2.1
CAZyme HRGMv2_2307_12 HRGMv2_2307_12_13 12684 15917 - GH136
NULL(UNKNOWN) HRGMv2_2307_12 HRGMv2_2307_12_14 15979 16806 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2307_12 HRGMv2_2307_12_15 17001 17870 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2307_12 HRGMv2_2307_12_16 17916 19874 - CBM32 | GH30_1
peptidase HRGMv2_2307_12 HRGMv2_2307_12_17 20365 21255 + S33.UPW
TC HRGMv2_2307_12 HRGMv2_2307_12_18 21359 22768 - 3.A.1.121.3
Gene ID: HRGMv2_2307_12_10
Type: TC
Location: 9117 - 10355 (-)
Gene ID: HRGMv2_2307_12_11
Type: pfam
Location: 10372 - 11160 (-)
Gene ID: HRGMv2_2307_12_12
Type: TC
Location: 11231 - 12472 (-)
Gene ID: HRGMv2_2307_12_13
Type: CAZyme
Location: 12684 - 15917 (-)
Gene ID: HRGMv2_2307_12_14
Type:
Location: 15979 - 16806 (-)
Gene ID: HRGMv2_2307_12_15
Type: TF
Location: 17001 - 17870 (+)
Gene ID: HRGMv2_2307_12_16
Type: CAZyme
Location: 17916 - 19874 (-)
Gene ID: HRGMv2_2307_12_17
Type: peptidase
Location: 20365 - 21255 (+)
Gene ID: HRGMv2_2307_12_18
Type: TC
Location: 21359 - 22768 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Faecalimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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