Cluster: HRGMv2_2307_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2307
- CGC Family ID: CGCFAM_04266
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2307_9 | HRGMv2_2307_9_10 | 7560 | 10853 | - | GH51_9 |
| CAZyme | HRGMv2_2307_9 | HRGMv2_2307_9_11 | 10869 | 15623 | - | CBM32 | GH20 |
| CAZyme | HRGMv2_2307_9 | HRGMv2_2307_9_12 | 15767 | 17500 | - | GH20 |
| CAZyme | HRGMv2_2307_9 | HRGMv2_2307_9_13 | 17680 | 23256 | - | CBM32 | GH2 |
| NULL(UNKNOWN) | HRGMv2_2307_9 | HRGMv2_2307_9_14 | 23417 | 23755 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2307_9 | HRGMv2_2307_9_15 | 23886 | 24149 | - | Ribosomal_S18 |
| TC | HRGMv2_2307_9 | HRGMv2_2307_9_16 | 24214 | 24648 | - | 3.A.7.19.1 |
Gene ID: HRGMv2_2307_9_10
Type: CAZyme
Location: 7560 - 10853 (-)
Type: CAZyme
Location: 7560 - 10853 (-)
Gene ID: HRGMv2_2307_9_11
Type: CAZyme
Location: 10869 - 15623 (-)
Type: CAZyme
Location: 10869 - 15623 (-)
Gene ID: HRGMv2_2307_9_12
Type: CAZyme
Location: 15767 - 17500 (-)
Type: CAZyme
Location: 15767 - 17500 (-)
Gene ID: HRGMv2_2307_9_13
Type: CAZyme
Location: 17680 - 23256 (-)
Type: CAZyme
Location: 17680 - 23256 (-)
Gene ID: HRGMv2_2307_9_14
Type:
Location: 23417 - 23755 (-)
Type:
Location: 23417 - 23755 (-)
Gene ID: HRGMv2_2307_9_15
Type: pfam
Location: 23886 - 24149 (-)
Type: pfam
Location: 23886 - 24149 (-)
Gene ID: HRGMv2_2307_9_16
Type: TC
Location: 24214 - 24648 (-)
Type: TC
Location: 24214 - 24648 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.