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Cluster: HRGMv2_2307_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2307_7 HRGMv2_2307_7_1 395 6115 + GH101
pfam HRGMv2_2307_7 HRGMv2_2307_7_2 6239 6856 + CBM9_2
STP HRGMv2_2307_7 HRGMv2_2307_7_3 6890 8632 - Fer4
TC HRGMv2_2307_7 HRGMv2_2307_7_4 8626 10458 - 3.D.1.5.1
pfam HRGMv2_2307_7 HRGMv2_2307_7_5 10726 11892 + GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
pfam HRGMv2_2307_7 HRGMv2_2307_7_6 11870 13405 + GalP_UDP_transf | GalP_UDP_tr_C
CAZyme HRGMv2_2307_7 HRGMv2_2307_7_7 13613 20722 + GH2 | GH2
pfam HRGMv2_2307_7 HRGMv2_2307_7_8 20844 23003 + S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
NULL(UNKNOWN) HRGMv2_2307_7 HRGMv2_2307_7_9 23106 23639 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2307_7 HRGMv2_2307_7_10 23908 24510 + 2.A.87.1.4
Gene ID: HRGMv2_2307_7_1
Type: CAZyme
Location: 395 - 6115 (+)
Gene ID: HRGMv2_2307_7_2
Type: pfam
Location: 6239 - 6856 (+)
Gene ID: HRGMv2_2307_7_3
Type: STP
Location: 6890 - 8632 (-)
Gene ID: HRGMv2_2307_7_4
Type: TC
Location: 8626 - 10458 (-)
Gene ID: HRGMv2_2307_7_5
Type: pfam
Location: 10726 - 11892 (+)
Gene ID: HRGMv2_2307_7_6
Type: pfam
Location: 11870 - 13405 (+)
Gene ID: HRGMv2_2307_7_7
Type: CAZyme
Location: 13613 - 20722 (+)
Gene ID: HRGMv2_2307_7_8
Type: pfam
Location: 20844 - 23003 (+)
Gene ID: HRGMv2_2307_7_9
Type:
Location: 23106 - 23639 (+)
Gene ID: HRGMv2_2307_7_10
Type: TC
Location: 23908 - 24510 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Faecalimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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