Cluster: HRGMv2_2307_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2307
- CGC Family ID: CGCFAM_03406
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2307_6 | HRGMv2_2307_6_16 | 16012 | 16557 | + | 2.A.51.1.6 |
| TF | HRGMv2_2307_6 | HRGMv2_2307_6_17 | 16606 | 17430 | + | HTH_AraC | HTH_AraC |
| TF | HRGMv2_2307_6 | HRGMv2_2307_6_18 | 17468 | 18355 | + | HTH_AraC |
| CAZyme | HRGMv2_2307_6 | HRGMv2_2307_6_19 | 18482 | 20647 | - | GH112 |
Gene ID: HRGMv2_2307_6_16
Type: TC
Location: 16012 - 16557 (+)
Type: TC
Location: 16012 - 16557 (+)
Gene ID: HRGMv2_2307_6_17
Type: TF
Location: 16606 - 17430 (+)
Type: TF
Location: 16606 - 17430 (+)
Gene ID: HRGMv2_2307_6_18
Type: TF
Location: 17468 - 18355 (+)
Type: TF
Location: 17468 - 18355 (+)
Gene ID: HRGMv2_2307_6_19
Type: CAZyme
Location: 18482 - 20647 (-)
Type: CAZyme
Location: 18482 - 20647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.