Cluster: HRGMv2_2307_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2307
- CGC Family ID: CGCFAM_01858
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2307_73 | HRGMv2_2307_73_1 | 3 | 731 | + | 3.A.1.25.4 |
| pfam | HRGMv2_2307_73 | HRGMv2_2307_73_2 | 816 | 1553 | + | PseudoU_synth_1 | PseudoU_synth_1 |
| pfam | HRGMv2_2307_73 | HRGMv2_2307_73_3 | 1998 | 2744 | + | RVT_1 |
| TC | HRGMv2_2307_73 | HRGMv2_2307_73_4 | 2755 | 4863 | + | 3.A.7.7.1 |
| sulfatase | HRGMv2_2307_73 | HRGMv2_2307_73_5 | 5014 | 5745 | + | S1_9 |
| CAZyme | HRGMv2_2307_73 | HRGMv2_2307_73_6 | 5757 | 6863 | + | CE9 |
Gene ID: HRGMv2_2307_73_1
Type: TC
Location: 3 - 731 (+)
Type: TC
Location: 3 - 731 (+)
Gene ID: HRGMv2_2307_73_2
Type: pfam
Location: 816 - 1553 (+)
Type: pfam
Location: 816 - 1553 (+)
Gene ID: HRGMv2_2307_73_3
Type: pfam
Location: 1998 - 2744 (+)
Type: pfam
Location: 1998 - 2744 (+)
Gene ID: HRGMv2_2307_73_4
Type: TC
Location: 2755 - 4863 (+)
Type: TC
Location: 2755 - 4863 (+)
Gene ID: HRGMv2_2307_73_5
Type: sulfatase
Location: 5014 - 5745 (+)
Type: sulfatase
Location: 5014 - 5745 (+)
Gene ID: HRGMv2_2307_73_6
Type: CAZyme
Location: 5757 - 6863 (+)
Type: CAZyme
Location: 5757 - 6863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.