Cluster: HRGMv2_2307_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2307
- CGC Family ID: CGCFAM_01564
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2307_68 | HRGMv2_2307_68_2 | 912 | 1943 | - | 3.A.1.11.8 |
| pfam | HRGMv2_2307_68 | HRGMv2_2307_68_3 | 1963 | 2775 | - | BPD_transp_1 |
| pfam | HRGMv2_2307_68 | HRGMv2_2307_68_4 | 2772 | 3641 | - | BPD_transp_1 |
| TC | HRGMv2_2307_68 | HRGMv2_2307_68_5 | 3643 | 4884 | - | 3.A.1.19.4 |
| CAZyme | HRGMv2_2307_68 | HRGMv2_2307_68_6 | 4905 | 6245 | - | GT2 |
| TC | HRGMv2_2307_68 | HRGMv2_2307_68_7 | 6242 | 6931 | - | 9.B.27.1.2 |
| pfam | HRGMv2_2307_68 | HRGMv2_2307_68_8 | 6933 | 7904 | - | CCG | CCG | Fer4_8 |
| TC | HRGMv2_2307_68 | HRGMv2_2307_68_9 | 7894 | 8574 | - | 9.B.27.1.1 |
Gene ID: HRGMv2_2307_68_2
Type: TC
Location: 912 - 1943 (-)
Type: TC
Location: 912 - 1943 (-)
Gene ID: HRGMv2_2307_68_3
Type: pfam
Location: 1963 - 2775 (-)
Type: pfam
Location: 1963 - 2775 (-)
Gene ID: HRGMv2_2307_68_4
Type: pfam
Location: 2772 - 3641 (-)
Type: pfam
Location: 2772 - 3641 (-)
Gene ID: HRGMv2_2307_68_5
Type: TC
Location: 3643 - 4884 (-)
Type: TC
Location: 3643 - 4884 (-)
Gene ID: HRGMv2_2307_68_6
Type: CAZyme
Location: 4905 - 6245 (-)
Type: CAZyme
Location: 4905 - 6245 (-)
Gene ID: HRGMv2_2307_68_7
Type: TC
Location: 6242 - 6931 (-)
Type: TC
Location: 6242 - 6931 (-)
Gene ID: HRGMv2_2307_68_8
Type: pfam
Location: 6933 - 7904 (-)
Type: pfam
Location: 6933 - 7904 (-)
Gene ID: HRGMv2_2307_68_9
Type: TC
Location: 7894 - 8574 (-)
Type: TC
Location: 7894 - 8574 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.