Cluster: HRGMv2_2307_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2307
- CGC Family ID: CGCFAM_00126
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2307_44 | HRGMv2_2307_44_6 | 5528 | 6925 | + | 9.B.18.1.3 |
| pfam | HRGMv2_2307_44 | HRGMv2_2307_44_7 | 6925 | 8025 | + | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_2307_44 | HRGMv2_2307_44_8 | 8037 | 9101 | + | GT2 |
| CAZyme | HRGMv2_2307_44 | HRGMv2_2307_44_9 | 9101 | 10174 | + | GT2 |
| pfam | HRGMv2_2307_44 | HRGMv2_2307_44_10 | 10183 | 11304 | + | Glyphos_transf |
| CAZyme | HRGMv2_2307_44 | HRGMv2_2307_44_11 | 11339 | 12265 | + | GT2 |
Gene ID: HRGMv2_2307_44_6
Type: TC
Location: 5528 - 6925 (+)
Type: TC
Location: 5528 - 6925 (+)
Gene ID: HRGMv2_2307_44_7
Type: pfam
Location: 6925 - 8025 (+)
Type: pfam
Location: 6925 - 8025 (+)
Gene ID: HRGMv2_2307_44_8
Type: CAZyme
Location: 8037 - 9101 (+)
Type: CAZyme
Location: 8037 - 9101 (+)
Gene ID: HRGMv2_2307_44_9
Type: CAZyme
Location: 9101 - 10174 (+)
Type: CAZyme
Location: 9101 - 10174 (+)
Gene ID: HRGMv2_2307_44_10
Type: pfam
Location: 10183 - 11304 (+)
Type: pfam
Location: 10183 - 11304 (+)
Gene ID: HRGMv2_2307_44_11
Type: CAZyme
Location: 11339 - 12265 (+)
Type: CAZyme
Location: 11339 - 12265 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.