Cluster: HRGMv2_2307_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2307
- CGC Family ID: CGCFAM_00008
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2307_40 | HRGMv2_2307_40_4 | 2427 | 3389 | + | GT2 |
| CAZyme | HRGMv2_2307_40 | HRGMv2_2307_40_5 | 3378 | 5810 | - | GT2 | GT2 |
| TC | HRGMv2_2307_40 | HRGMv2_2307_40_6 | 5811 | 6551 | - | 3.A.1.103.6 |
| TC | HRGMv2_2307_40 | HRGMv2_2307_40_7 | 6560 | 7324 | - | 3.A.1.103.6 |
| STP | HRGMv2_2307_40 | HRGMv2_2307_40_8 | 7402 | 8328 | - | Rhodanese | Rhodanese |
| CAZyme | HRGMv2_2307_40 | HRGMv2_2307_40_9 | 8325 | 9659 | - | GT2 |
Gene ID: HRGMv2_2307_40_4
Type: CAZyme
Location: 2427 - 3389 (+)
Type: CAZyme
Location: 2427 - 3389 (+)
Gene ID: HRGMv2_2307_40_5
Type: CAZyme
Location: 3378 - 5810 (-)
Type: CAZyme
Location: 3378 - 5810 (-)
Gene ID: HRGMv2_2307_40_6
Type: TC
Location: 5811 - 6551 (-)
Type: TC
Location: 5811 - 6551 (-)
Gene ID: HRGMv2_2307_40_7
Type: TC
Location: 6560 - 7324 (-)
Type: TC
Location: 6560 - 7324 (-)
Gene ID: HRGMv2_2307_40_8
Type: STP
Location: 7402 - 8328 (-)
Type: STP
Location: 7402 - 8328 (-)
Gene ID: HRGMv2_2307_40_9
Type: CAZyme
Location: 8325 - 9659 (-)
Type: CAZyme
Location: 8325 - 9659 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.