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Cluster: HRGMv2_2307_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2307_1 HRGMv2_2307_1_10 7747 8466 + 3.A.2.1.5
TC HRGMv2_2307_1 HRGMv2_2307_1_11 8505 8771 + 3.A.2.1.5
pfam HRGMv2_2307_1 HRGMv2_2307_1_12 8815 9330 + ATP-synt_B
TC HRGMv2_2307_1 HRGMv2_2307_1_13 9318 9863 + 3.A.2.1.2
TC HRGMv2_2307_1 HRGMv2_2307_1_14 9891 11393 + 3.A.2.1.5
TC HRGMv2_2307_1 HRGMv2_2307_1_15 11410 12270 + 3.A.2.1.5
TC HRGMv2_2307_1 HRGMv2_2307_1_16 12311 13702 + 3.A.2.1.5
TC HRGMv2_2307_1 HRGMv2_2307_1_17 13715 14116 + 3.A.2.1.5
CAZyme HRGMv2_2307_1 HRGMv2_2307_1_18 14290 20169 + CBM51 | CBM51 | GH2
Gene ID: HRGMv2_2307_1_10
Type: TC
Location: 7747 - 8466 (+)
Gene ID: HRGMv2_2307_1_11
Type: TC
Location: 8505 - 8771 (+)
Gene ID: HRGMv2_2307_1_12
Type: pfam
Location: 8815 - 9330 (+)
Gene ID: HRGMv2_2307_1_13
Type: TC
Location: 9318 - 9863 (+)
Gene ID: HRGMv2_2307_1_14
Type: TC
Location: 9891 - 11393 (+)
Gene ID: HRGMv2_2307_1_15
Type: TC
Location: 11410 - 12270 (+)
Gene ID: HRGMv2_2307_1_16
Type: TC
Location: 12311 - 13702 (+)
Gene ID: HRGMv2_2307_1_17
Type: TC
Location: 13715 - 14116 (+)
Gene ID: HRGMv2_2307_1_18
Type: CAZyme
Location: 14290 - 20169 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Faecalimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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