dbCAN Logo

Cluster: HRGMv2_2305_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2305_13 HRGMv2_2305_13_2 1404 2879 + GH77
TF HRGMv2_2305_13 HRGMv2_2305_13_3 2913 3947 + LacI
TC HRGMv2_2305_13 HRGMv2_2305_13_4 4172 4651 + 2.A.51.1.6
TC HRGMv2_2305_13 HRGMv2_2305_13_5 4648 5211 + 2.A.51.1.6
STP HRGMv2_2305_13 HRGMv2_2305_13_6 5794 6723 + SBP_bac_1
TC HRGMv2_2305_13 HRGMv2_2305_13_7 7070 7903 + 3.A.1.1.4
pfam HRGMv2_2305_13 HRGMv2_2305_13_8 7911 8078 + Alpha-L-AF_C
CAZyme HRGMv2_2305_13 HRGMv2_2305_13_9 8376 9890 + GH51_1
Gene ID: HRGMv2_2305_13_2
Type: CAZyme
Location: 1404 - 2879 (+)
Gene ID: HRGMv2_2305_13_3
Type: TF
Location: 2913 - 3947 (+)
Gene ID: HRGMv2_2305_13_4
Type: TC
Location: 4172 - 4651 (+)
Gene ID: HRGMv2_2305_13_5
Type: TC
Location: 4648 - 5211 (+)
Gene ID: HRGMv2_2305_13_6
Type: STP
Location: 5794 - 6723 (+)
Gene ID: HRGMv2_2305_13_7
Type: TC
Location: 7070 - 7903 (+)
Gene ID: HRGMv2_2305_13_8
Type: pfam
Location: 7911 - 8078 (+)
Gene ID: HRGMv2_2305_13_9
Type: CAZyme
Location: 8376 - 9890 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List