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Cluster: HRGMv2_2305_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2305_3 HRGMv2_2305_3_3 2238 3392 + CE9
pfam HRGMv2_2305_3 HRGMv2_2305_3_4 3404 4555 + F_bP_aldolase
TC HRGMv2_2305_3 HRGMv2_2305_3_5 4821 5618 + 3.A.1.17.1
TC HRGMv2_2305_3 HRGMv2_2305_3_6 5594 6385 + 3.A.1.16.2
TC HRGMv2_2305_3 HRGMv2_2305_3_7 6446 7498 + 3.A.1.17.2
Gene ID: HRGMv2_2305_3_3
Type: CAZyme
Location: 2238 - 3392 (+)
Gene ID: HRGMv2_2305_3_4
Type: pfam
Location: 3404 - 4555 (+)
Gene ID: HRGMv2_2305_3_5
Type: TC
Location: 4821 - 5618 (+)
Gene ID: HRGMv2_2305_3_6
Type: TC
Location: 5594 - 6385 (+)
Gene ID: HRGMv2_2305_3_7
Type: TC
Location: 6446 - 7498 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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