Cluster: HRGMv2_2305_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2305
- CGC Family ID: CGCFAM_06723
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2305_106 | HRGMv2_2305_106_2 | 62 | 739 | + | 8.A.3.2.3 |
| NULL(UNKNOWN) | HRGMv2_2305_106 | HRGMv2_2305_106_3 | 760 | 1632 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2305_106 | HRGMv2_2305_106_4 | 1666 | 3117 | + | 9.B.18.1.2 |
| pfam | HRGMv2_2305_106 | HRGMv2_2305_106_5 | 3233 | 3523 | + | NAD_Gly3P_dh_N | TrkA_N | 3HCDH_N | UDPG_MGDP_dh_N | F420_oxidored |
| NULL(UNKNOWN) | HRGMv2_2305_106 | HRGMv2_2305_106_6 | 3523 | 3624 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2305_106 | HRGMv2_2305_106_7 | 3807 | 5036 | + | GT4 |
Gene ID: HRGMv2_2305_106_2
Type: TC
Location: 62 - 739 (+)
Type: TC
Location: 62 - 739 (+)
Gene ID: HRGMv2_2305_106_3
Type:
Location: 760 - 1632 (+)
Type:
Location: 760 - 1632 (+)
Gene ID: HRGMv2_2305_106_4
Type: TC
Location: 1666 - 3117 (+)
Type: TC
Location: 1666 - 3117 (+)
Gene ID: HRGMv2_2305_106_5
Type: pfam
Location: 3233 - 3523 (+)
Type: pfam
Location: 3233 - 3523 (+)
Gene ID: HRGMv2_2305_106_6
Type:
Location: 3523 - 3624 (+)
Type:
Location: 3523 - 3624 (+)
Gene ID: HRGMv2_2305_106_7
Type: CAZyme
Location: 3807 - 5036 (+)
Type: CAZyme
Location: 3807 - 5036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia sp900556555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2305_106_6 | vegan > omnivore | 3.36225 | 0.04974 |