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Cluster: HRGMv2_2305_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2305_26 HRGMv2_2305_26_30 21676 22365 + 3.A.1.134.3
pfam HRGMv2_2305_26 HRGMv2_2305_26_31 22362 25040 + FtsX | FtsX | MacB_PCD
CAZyme HRGMv2_2305_26 HRGMv2_2305_26_32 25148 26551 + GH13_31
TF HRGMv2_2305_26 HRGMv2_2305_26_33 26880 27722 + MerR
pfam HRGMv2_2305_26 HRGMv2_2305_26_34 27914 28807 + CN_hydrolase
TC HRGMv2_2305_26 HRGMv2_2305_26_35 28826 30130 + 9.A.5.2.1
NULL(UNKNOWN) HRGMv2_2305_26 HRGMv2_2305_26_36 30243 31586 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2305_26 HRGMv2_2305_26_37 31643 33034 - 2.A.118.1.3
Gene ID: HRGMv2_2305_26_30
Type: TC
Location: 21676 - 22365 (+)
Gene ID: HRGMv2_2305_26_31
Type: pfam
Location: 22362 - 25040 (+)
Gene ID: HRGMv2_2305_26_32
Type: CAZyme
Location: 25148 - 26551 (+)
Gene ID: HRGMv2_2305_26_33
Type: TF
Location: 26880 - 27722 (+)
Gene ID: HRGMv2_2305_26_34
Type: pfam
Location: 27914 - 28807 (+)
Gene ID: HRGMv2_2305_26_35
Type: TC
Location: 28826 - 30130 (+)
Gene ID: HRGMv2_2305_26_36
Type:
Location: 30243 - 31586 (+)
Gene ID: HRGMv2_2305_26_37
Type: TC
Location: 31643 - 33034 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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