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Cluster: HRGMv2_2302_CGC99

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_46 HRGMv2_2302_46_12 10755 11729 + 3.A.1.1.10
TC HRGMv2_2302_46 HRGMv2_2302_46_13 11740 12657 + 3.A.1.1.10
TC HRGMv2_2302_46 HRGMv2_2302_46_14 12793 14505 + 3.A.1.1.9
CAZyme HRGMv2_2302_46 HRGMv2_2302_46_15 14678 17020 + GH95
NULL(UNKNOWN) HRGMv2_2302_46 HRGMv2_2302_46_16 17017 17832 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2302_46 HRGMv2_2302_46_17 17955 18647 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_46 HRGMv2_2302_46_18 18998 20680 + 3.A.1.1.10
TC HRGMv2_2302_46 HRGMv2_2302_46_19 20745 21656 + 3.A.1.1.10
TC HRGMv2_2302_46 HRGMv2_2302_46_20 21712 22605 + 3.A.1.1.10
Gene ID: HRGMv2_2302_46_12
Type: TC
Location: 10755 - 11729 (+)
Gene ID: HRGMv2_2302_46_13
Type: TC
Location: 11740 - 12657 (+)
Gene ID: HRGMv2_2302_46_14
Type: TC
Location: 12793 - 14505 (+)
Gene ID: HRGMv2_2302_46_15
Type: CAZyme
Location: 14678 - 17020 (+)
Gene ID: HRGMv2_2302_46_16
Type:
Location: 17017 - 17832 (+)
Gene ID: HRGMv2_2302_46_17
Type:
Location: 17955 - 18647 (+)
Gene ID: HRGMv2_2302_46_18
Type: TC
Location: 18998 - 20680 (+)
Gene ID: HRGMv2_2302_46_19
Type: TC
Location: 20745 - 21656 (+)
Gene ID: HRGMv2_2302_46_20
Type: TC
Location: 21712 - 22605 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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