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Cluster: HRGMv2_2302_CGC97

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_45 HRGMv2_2302_45_1 158 1423 - 2.A.49.9.2
NULL(UNKNOWN) HRGMv2_2302_45 HRGMv2_2302_45_2 1652 2224 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2302_45 HRGMv2_2302_45_3 2691 5927 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_2302_45 HRGMv2_2302_45_4 6156 8657 + GT35
TC HRGMv2_2302_45 HRGMv2_2302_45_5 8971 9828 - 3.A.1.1.47
pfam HRGMv2_2302_45 HRGMv2_2302_45_6 9838 10749 - BPD_transp_1
STP HRGMv2_2302_45 HRGMv2_2302_45_7 10895 12235 - SBP_bac_1
TC HRGMv2_2302_45 HRGMv2_2302_45_8 12493 14268 + 9.B.33.1.1
TF HRGMv2_2302_45 HRGMv2_2302_45_9 14243 15766 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2302_45 HRGMv2_2302_45_10 15836 18802 - GH106
Gene ID: HRGMv2_2302_45_1
Type: TC
Location: 158 - 1423 (-)
Gene ID: HRGMv2_2302_45_2
Type:
Location: 1652 - 2224 (+)
Gene ID: HRGMv2_2302_45_3
Type: pfam
Location: 2691 - 5927 (+)
Gene ID: HRGMv2_2302_45_4
Type: CAZyme
Location: 6156 - 8657 (+)
Gene ID: HRGMv2_2302_45_5
Type: TC
Location: 8971 - 9828 (-)
Gene ID: HRGMv2_2302_45_6
Type: pfam
Location: 9838 - 10749 (-)
Gene ID: HRGMv2_2302_45_7
Type: STP
Location: 10895 - 12235 (-)
Gene ID: HRGMv2_2302_45_8
Type: TC
Location: 12493 - 14268 (+)
Gene ID: HRGMv2_2302_45_9
Type: TF
Location: 14243 - 15766 (+)
Gene ID: HRGMv2_2302_45_10
Type: CAZyme
Location: 15836 - 18802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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