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Cluster: HRGMv2_2302_CGC96

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_43 HRGMv2_2302_43_37 40496 41806 + GH29
CAZyme HRGMv2_2302_43 HRGMv2_2302_43_38 41911 43206 + GH29
TC HRGMv2_2302_43 HRGMv2_2302_43_39 43148 44182 + 3.A.1.1.10
TC HRGMv2_2302_43 HRGMv2_2302_43_40 44200 45102 + 3.A.1.1.10
STP HRGMv2_2302_43 HRGMv2_2302_43_41 45138 46805 + SBP_bac_1
CAZyme HRGMv2_2302_43 HRGMv2_2302_43_42 46883 48322 + GH29
CAZyme HRGMv2_2302_43 HRGMv2_2302_43_43 48297 50090 + GH35
TC HRGMv2_2302_43 HRGMv2_2302_43_44 50252 52009 + 3.A.1.106.2
Gene ID: HRGMv2_2302_43_37
Type: CAZyme
Location: 40496 - 41806 (+)
Gene ID: HRGMv2_2302_43_38
Type: CAZyme
Location: 41911 - 43206 (+)
Gene ID: HRGMv2_2302_43_39
Type: TC
Location: 43148 - 44182 (+)
Gene ID: HRGMv2_2302_43_40
Type: TC
Location: 44200 - 45102 (+)
Gene ID: HRGMv2_2302_43_41
Type: STP
Location: 45138 - 46805 (+)
Gene ID: HRGMv2_2302_43_42
Type: CAZyme
Location: 46883 - 48322 (+)
Gene ID: HRGMv2_2302_43_43
Type: CAZyme
Location: 48297 - 50090 (+)
Gene ID: HRGMv2_2302_43_44
Type: TC
Location: 50252 - 52009 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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