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Cluster: HRGMv2_2302_CGC95

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_41 HRGMv2_2302_41_36 40931 42601 + GH18
pfam HRGMv2_2302_41 HRGMv2_2302_41_37 42720 43424 + Amidase_3
TC HRGMv2_2302_41 HRGMv2_2302_41_38 43546 45282 + 9.B.33.1.1
TF HRGMv2_2302_41 HRGMv2_2302_41_39 45260 46855 + HTH_AraC | HTH_AraC
STP HRGMv2_2302_41 HRGMv2_2302_41_40 47013 48464 + SBP_bac_1
TC HRGMv2_2302_41 HRGMv2_2302_41_41 48554 49426 + 3.A.1.1.11
TC HRGMv2_2302_41 HRGMv2_2302_41_42 49435 50262 + 3.A.1.1.34
pfam HRGMv2_2302_41 HRGMv2_2302_41_43 50323 51246 + DHDPS
CAZyme HRGMv2_2302_41 HRGMv2_2302_41_44 51257 53359 + CBM67 | GH78
Gene ID: HRGMv2_2302_41_36
Type: CAZyme
Location: 40931 - 42601 (+)
Gene ID: HRGMv2_2302_41_37
Type: pfam
Location: 42720 - 43424 (+)
Gene ID: HRGMv2_2302_41_38
Type: TC
Location: 43546 - 45282 (+)
Gene ID: HRGMv2_2302_41_39
Type: TF
Location: 45260 - 46855 (+)
Gene ID: HRGMv2_2302_41_40
Type: STP
Location: 47013 - 48464 (+)
Gene ID: HRGMv2_2302_41_41
Type: TC
Location: 48554 - 49426 (+)
Gene ID: HRGMv2_2302_41_42
Type: TC
Location: 49435 - 50262 (+)
Gene ID: HRGMv2_2302_41_43
Type: pfam
Location: 50323 - 51246 (+)
Gene ID: HRGMv2_2302_41_44
Type: CAZyme
Location: 51257 - 53359 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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