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Cluster: HRGMv2_2302_CGC92

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_39 HRGMv2_2302_39_9 7777 8103 - 3.A.1.23.8
TC HRGMv2_2302_39 HRGMv2_2302_39_10 8144 8887 - 3.A.1.23.8
TC HRGMv2_2302_39 HRGMv2_2302_39_11 8884 9738 - 3.A.1.23.8
pfam HRGMv2_2302_39 HRGMv2_2302_39_12 9771 10532 - CbiQ
CAZyme HRGMv2_2302_39 HRGMv2_2302_39_13 11007 12755 - CBM34 | GH13_20
TC HRGMv2_2302_39 HRGMv2_2302_39_14 12785 13627 - 3.A.1.1.6
TC HRGMv2_2302_39 HRGMv2_2302_39_15 13624 14553 - 3.A.1.1.2
TC HRGMv2_2302_39 HRGMv2_2302_39_16 14645 15964 - 3.A.1.1.16
Gene ID: HRGMv2_2302_39_9
Type: TC
Location: 7777 - 8103 (-)
Gene ID: HRGMv2_2302_39_10
Type: TC
Location: 8144 - 8887 (-)
Gene ID: HRGMv2_2302_39_11
Type: TC
Location: 8884 - 9738 (-)
Gene ID: HRGMv2_2302_39_12
Type: pfam
Location: 9771 - 10532 (-)
Gene ID: HRGMv2_2302_39_13
Type: CAZyme
Location: 11007 - 12755 (-)
Gene ID: HRGMv2_2302_39_14
Type: TC
Location: 12785 - 13627 (-)
Gene ID: HRGMv2_2302_39_15
Type: TC
Location: 13624 - 14553 (-)
Gene ID: HRGMv2_2302_39_16
Type: TC
Location: 14645 - 15964 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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