Cluster: HRGMv2_2302_CGC87
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2302
- CGC Family ID: CGCFAM_03383
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2302_36 | HRGMv2_2302_36_11 | 10616 | 13084 | - | GH38 |
| CAZyme | HRGMv2_2302_36 | HRGMv2_2302_36_12 | 13113 | 15686 | - | GH38 |
| pfam | HRGMv2_2302_36 | HRGMv2_2302_36_13 | 15739 | 18867 | - | FAD_binding_2 | FAD_oxidored | FAD_oxidored |
| CAZyme | HRGMv2_2302_36 | HRGMv2_2302_36_14 | 18860 | 20359 | - | GH13_18 |
| pfam | HRGMv2_2302_36 | HRGMv2_2302_36_15 | 20377 | 21096 | - | Lactamase_B |
| STP | HRGMv2_2302_36 | HRGMv2_2302_36_16 | 21172 | 22188 | - | Glucokinase |
| CAZyme | HRGMv2_2302_36 | HRGMv2_2302_36_17 | 22179 | 24776 | - | GH2 |
| pfam | HRGMv2_2302_36 | HRGMv2_2302_36_18 | 24767 | 26098 | - | FGGY_N | FGGY_C |
| CAZyme | HRGMv2_2302_36 | HRGMv2_2302_36_19 | 26129 | 28222 | - | GH36 |
| TF | HRGMv2_2302_36 | HRGMv2_2302_36_20 | 28313 | 29566 | - | 0044258 |
| STP | HRGMv2_2302_36 | HRGMv2_2302_36_21 | 29668 | 31017 | - | SBP_bac_1 |
| TC | HRGMv2_2302_36 | HRGMv2_2302_36_22 | 31087 | 31932 | - | 3.A.1.1.34 |
| TC | HRGMv2_2302_36 | HRGMv2_2302_36_23 | 31932 | 32849 | - | 3.A.1.1.34 |
| pfam | HRGMv2_2302_36 | HRGMv2_2302_36_24 | 33501 | 34421 | - | PDDEXK_2 |
| CAZyme | HRGMv2_2302_36 | HRGMv2_2302_36_25 | 34767 | 36878 | - | GH20 |
| TC | HRGMv2_2302_36 | HRGMv2_2302_36_26 | 37026 | 37868 | - | 3.A.1.141.1 |
| pfam | HRGMv2_2302_36 | HRGMv2_2302_36_27 | 37871 | 38671 | - | ABC2_membrane_6 |
| TC | HRGMv2_2302_36 | HRGMv2_2302_36_28 | 38668 | 39654 | - | 3.A.1.141.1 |
Gene ID: HRGMv2_2302_36_11
Type: CAZyme
Location: 10616 - 13084 (-)
Type: CAZyme
Location: 10616 - 13084 (-)
Gene ID: HRGMv2_2302_36_12
Type: CAZyme
Location: 13113 - 15686 (-)
Type: CAZyme
Location: 13113 - 15686 (-)
Gene ID: HRGMv2_2302_36_13
Type: pfam
Location: 15739 - 18867 (-)
Type: pfam
Location: 15739 - 18867 (-)
Gene ID: HRGMv2_2302_36_14
Type: CAZyme
Location: 18860 - 20359 (-)
Type: CAZyme
Location: 18860 - 20359 (-)
Gene ID: HRGMv2_2302_36_15
Type: pfam
Location: 20377 - 21096 (-)
Type: pfam
Location: 20377 - 21096 (-)
Gene ID: HRGMv2_2302_36_16
Type: STP
Location: 21172 - 22188 (-)
Type: STP
Location: 21172 - 22188 (-)
Gene ID: HRGMv2_2302_36_17
Type: CAZyme
Location: 22179 - 24776 (-)
Type: CAZyme
Location: 22179 - 24776 (-)
Gene ID: HRGMv2_2302_36_18
Type: pfam
Location: 24767 - 26098 (-)
Type: pfam
Location: 24767 - 26098 (-)
Gene ID: HRGMv2_2302_36_19
Type: CAZyme
Location: 26129 - 28222 (-)
Type: CAZyme
Location: 26129 - 28222 (-)
Gene ID: HRGMv2_2302_36_20
Type: TF
Location: 28313 - 29566 (-)
Type: TF
Location: 28313 - 29566 (-)
Gene ID: HRGMv2_2302_36_21
Type: STP
Location: 29668 - 31017 (-)
Type: STP
Location: 29668 - 31017 (-)
Gene ID: HRGMv2_2302_36_22
Type: TC
Location: 31087 - 31932 (-)
Type: TC
Location: 31087 - 31932 (-)
Gene ID: HRGMv2_2302_36_23
Type: TC
Location: 31932 - 32849 (-)
Type: TC
Location: 31932 - 32849 (-)
Gene ID: HRGMv2_2302_36_24
Type: pfam
Location: 33501 - 34421 (-)
Type: pfam
Location: 33501 - 34421 (-)
Gene ID: HRGMv2_2302_36_25
Type: CAZyme
Location: 34767 - 36878 (-)
Type: CAZyme
Location: 34767 - 36878 (-)
Gene ID: HRGMv2_2302_36_26
Type: TC
Location: 37026 - 37868 (-)
Type: TC
Location: 37026 - 37868 (-)
Gene ID: HRGMv2_2302_36_27
Type: pfam
Location: 37871 - 38671 (-)
Type: pfam
Location: 37871 - 38671 (-)
Gene ID: HRGMv2_2302_36_28
Type: TC
Location: 38668 - 39654 (-)
Type: TC
Location: 38668 - 39654 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eisenbergiella
Species
Eisenbergiella sp003478085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.