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Cluster: HRGMv2_2302_CGC86

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_34 HRGMv2_2302_34_47 31053 32024 - CE1
peptidase HRGMv2_2302_34 HRGMv2_2302_34_48 32040 33197 - S12.UPW
TC HRGMv2_2302_34 HRGMv2_2302_34_49 33291 34649 - 3.A.1.1.3
peptidase HRGMv2_2302_34 HRGMv2_2302_34_50 34726 36459 - S15.UNW
peptidase HRGMv2_2302_34 HRGMv2_2302_34_51 36502 37665 - S12.UPW
TC HRGMv2_2302_34 HRGMv2_2302_34_52 37682 38515 - 3.A.1.1.36
TC HRGMv2_2302_34 HRGMv2_2302_34_53 38526 39425 - 3.A.1.1.4
peptidase HRGMv2_2302_34 HRGMv2_2302_34_54 39454 40302 - S09.UPW
TC HRGMv2_2302_34 HRGMv2_2302_34_55 40303 41487 - 2.A.1.46.5
CAZyme HRGMv2_2302_34 HRGMv2_2302_34_56 41516 43192 - CE1
TF HRGMv2_2302_34 HRGMv2_2302_34_57 43377 44447 - LacI
CAZyme HRGMv2_2302_34 HRGMv2_2302_34_58 44718 47153 - GH2
CAZyme HRGMv2_2302_34 HRGMv2_2302_34_59 47301 49598 - GH95
NULL(UNKNOWN) HRGMv2_2302_34 HRGMv2_2302_34_60 49685 51478 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_34 HRGMv2_2302_34_61 51580 52470 - 3.A.1.1.10
TC HRGMv2_2302_34 HRGMv2_2302_34_62 52484 53434 - 3.A.1.1.10
TF HRGMv2_2302_34 HRGMv2_2302_34_63 53556 55886 - HTH_AraC
CAZyme HRGMv2_2302_34 HRGMv2_2302_34_64 55874 58105 - GH95
Gene ID: HRGMv2_2302_34_47
Type: CAZyme
Location: 31053 - 32024 (-)
Gene ID: HRGMv2_2302_34_48
Type: peptidase
Location: 32040 - 33197 (-)
Gene ID: HRGMv2_2302_34_49
Type: TC
Location: 33291 - 34649 (-)
Gene ID: HRGMv2_2302_34_50
Type: peptidase
Location: 34726 - 36459 (-)
Gene ID: HRGMv2_2302_34_51
Type: peptidase
Location: 36502 - 37665 (-)
Gene ID: HRGMv2_2302_34_52
Type: TC
Location: 37682 - 38515 (-)
Gene ID: HRGMv2_2302_34_53
Type: TC
Location: 38526 - 39425 (-)
Gene ID: HRGMv2_2302_34_54
Type: peptidase
Location: 39454 - 40302 (-)
Gene ID: HRGMv2_2302_34_55
Type: TC
Location: 40303 - 41487 (-)
Gene ID: HRGMv2_2302_34_56
Type: CAZyme
Location: 41516 - 43192 (-)
Gene ID: HRGMv2_2302_34_57
Type: TF
Location: 43377 - 44447 (-)
Gene ID: HRGMv2_2302_34_58
Type: CAZyme
Location: 44718 - 47153 (-)
Gene ID: HRGMv2_2302_34_59
Type: CAZyme
Location: 47301 - 49598 (-)
Gene ID: HRGMv2_2302_34_60
Type:
Location: 49685 - 51478 (-)
Gene ID: HRGMv2_2302_34_61
Type: TC
Location: 51580 - 52470 (-)
Gene ID: HRGMv2_2302_34_62
Type: TC
Location: 52484 - 53434 (-)
Gene ID: HRGMv2_2302_34_63
Type: TF
Location: 53556 - 55886 (-)
Gene ID: HRGMv2_2302_34_64
Type: CAZyme
Location: 55874 - 58105 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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