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Cluster: HRGMv2_2302_CGC83

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_31 HRGMv2_2302_31_29 28001 29674 + 3.A.1.1.10
TC HRGMv2_2302_31 HRGMv2_2302_31_30 29687 30610 + 3.A.1.1.9
TC HRGMv2_2302_31 HRGMv2_2302_31_31 30683 31564 + 3.A.1.1.9
CAZyme HRGMv2_2302_31 HRGMv2_2302_31_32 31581 34256 + CBM67 | GH78
TF HRGMv2_2302_31 HRGMv2_2302_31_33 34284 35120 - HTH_AraC
TC HRGMv2_2302_31 HRGMv2_2302_31_34 35609 36550 + 3.A.1.1.10
TC HRGMv2_2302_31 HRGMv2_2302_31_35 36610 37527 + 3.A.1.1.10
Gene ID: HRGMv2_2302_31_29
Type: TC
Location: 28001 - 29674 (+)
Gene ID: HRGMv2_2302_31_30
Type: TC
Location: 29687 - 30610 (+)
Gene ID: HRGMv2_2302_31_31
Type: TC
Location: 30683 - 31564 (+)
Gene ID: HRGMv2_2302_31_32
Type: CAZyme
Location: 31581 - 34256 (+)
Gene ID: HRGMv2_2302_31_33
Type: TF
Location: 34284 - 35120 (-)
Gene ID: HRGMv2_2302_31_34
Type: TC
Location: 35609 - 36550 (+)
Gene ID: HRGMv2_2302_31_35
Type: TC
Location: 36610 - 37527 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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