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Cluster: HRGMv2_2302_CGC82

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_31 HRGMv2_2302_31_10 10161 11081 + 3.A.1.1.10
TC HRGMv2_2302_31 HRGMv2_2302_31_11 11092 11961 + 3.A.1.1.29
CAZyme HRGMv2_2302_31 HRGMv2_2302_31_12 11991 13688 + GH2
TC HRGMv2_2302_31 HRGMv2_2302_31_13 14016 15764 + 8.A.59.2.1
TF HRGMv2_2302_31 HRGMv2_2302_31_14 15739 16539 + HTH_AraC | HTH_AraC
STP HRGMv2_2302_31 HRGMv2_2302_31_15 16742 18115 + SBP_bac_1
TC HRGMv2_2302_31 HRGMv2_2302_31_16 18184 19053 + 3.A.1.1.20
TC HRGMv2_2302_31 HRGMv2_2302_31_17 19060 19896 + 3.A.1.1.18
Gene ID: HRGMv2_2302_31_10
Type: TC
Location: 10161 - 11081 (+)
Gene ID: HRGMv2_2302_31_11
Type: TC
Location: 11092 - 11961 (+)
Gene ID: HRGMv2_2302_31_12
Type: CAZyme
Location: 11991 - 13688 (+)
Gene ID: HRGMv2_2302_31_13
Type: TC
Location: 14016 - 15764 (+)
Gene ID: HRGMv2_2302_31_14
Type: TF
Location: 15739 - 16539 (+)
Gene ID: HRGMv2_2302_31_15
Type: STP
Location: 16742 - 18115 (+)
Gene ID: HRGMv2_2302_31_16
Type: TC
Location: 18184 - 19053 (+)
Gene ID: HRGMv2_2302_31_17
Type: TC
Location: 19060 - 19896 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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