dbCAN Logo

Cluster: HRGMv2_2302_CGC73

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_27 HRGMv2_2302_27_21 23152 25500 + GH31_4
CAZyme HRGMv2_2302_27 HRGMv2_2302_27_22 25573 27189 + GH28
NULL(UNKNOWN) HRGMv2_2302_27 HRGMv2_2302_27_23 27213 28229 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_27 HRGMv2_2302_27_24 28564 30486 - 8.A.59.2.1
TC HRGMv2_2302_27 HRGMv2_2302_27_25 30696 31637 + 3.A.1.1.9
TC HRGMv2_2302_27 HRGMv2_2302_27_26 31732 32658 + 3.A.1.1.29
STP HRGMv2_2302_27 HRGMv2_2302_27_27 32704 34464 + SBP_bac_1
TF HRGMv2_2302_27 HRGMv2_2302_27_28 34512 36005 - HTH_AraC
CAZyme HRGMv2_2302_27 HRGMv2_2302_27_29 36193 38532 + GH95
CAZyme HRGMv2_2302_27 HRGMv2_2302_27_30 38810 41653 + CBM67 | GH78
pfam HRGMv2_2302_27 HRGMv2_2302_27_31 41656 42585 + IU_nuc_hydro
NULL(UNKNOWN) HRGMv2_2302_27 HRGMv2_2302_27_32 42582 43715 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2302_27 HRGMv2_2302_27_33 43816 46545 + GH138
CAZyme HRGMv2_2302_27 HRGMv2_2302_27_34 46597 47955 + GH29
CAZyme HRGMv2_2302_27 HRGMv2_2302_27_35 47966 50029 + GH42
TC HRGMv2_2302_27 HRGMv2_2302_27_36 50677 51402 + 2.A.87.1.4
Gene ID: HRGMv2_2302_27_21
Type: CAZyme
Location: 23152 - 25500 (+)
Gene ID: HRGMv2_2302_27_22
Type: CAZyme
Location: 25573 - 27189 (+)
Gene ID: HRGMv2_2302_27_23
Type:
Location: 27213 - 28229 (-)
Gene ID: HRGMv2_2302_27_24
Type: TC
Location: 28564 - 30486 (-)
Gene ID: HRGMv2_2302_27_25
Type: TC
Location: 30696 - 31637 (+)
Gene ID: HRGMv2_2302_27_26
Type: TC
Location: 31732 - 32658 (+)
Gene ID: HRGMv2_2302_27_27
Type: STP
Location: 32704 - 34464 (+)
Gene ID: HRGMv2_2302_27_28
Type: TF
Location: 34512 - 36005 (-)
Gene ID: HRGMv2_2302_27_29
Type: CAZyme
Location: 36193 - 38532 (+)
Gene ID: HRGMv2_2302_27_30
Type: CAZyme
Location: 38810 - 41653 (+)
Gene ID: HRGMv2_2302_27_31
Type: pfam
Location: 41656 - 42585 (+)
Gene ID: HRGMv2_2302_27_32
Type:
Location: 42582 - 43715 (+)
Gene ID: HRGMv2_2302_27_33
Type: CAZyme
Location: 43816 - 46545 (+)
Gene ID: HRGMv2_2302_27_34
Type: CAZyme
Location: 46597 - 47955 (+)
Gene ID: HRGMv2_2302_27_35
Type: CAZyme
Location: 47966 - 50029 (+)
Gene ID: HRGMv2_2302_27_36
Type: TC
Location: 50677 - 51402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List