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Cluster: HRGMv2_2302_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_26 HRGMv2_2302_26_40 45972 47630 - 4.C.1.1.4
TC HRGMv2_2302_26 HRGMv2_2302_26_41 47627 49135 - 8.A.59.4.2
STP HRGMv2_2302_26 HRGMv2_2302_26_42 49132 51015 - HATPase_c | HisKA
TC HRGMv2_2302_26 HRGMv2_2302_26_43 51041 56212 - 4.C.1.1.6
pfam HRGMv2_2302_26 HRGMv2_2302_26_44 56209 58473 - AMP-binding | Condensation
TC HRGMv2_2302_26 HRGMv2_2302_26_45 58685 60316 - 3.B.1.1.5
pfam HRGMv2_2302_26 HRGMv2_2302_26_46 60446 61630 - GLF | NAD_binding_8
NULL(UNKNOWN) HRGMv2_2302_26 HRGMv2_2302_26_47 61646 61981 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2302_26 HRGMv2_2302_26_48 62453 64411 - GH120
Gene ID: HRGMv2_2302_26_40
Type: TC
Location: 45972 - 47630 (-)
Gene ID: HRGMv2_2302_26_41
Type: TC
Location: 47627 - 49135 (-)
Gene ID: HRGMv2_2302_26_42
Type: STP
Location: 49132 - 51015 (-)
Gene ID: HRGMv2_2302_26_43
Type: TC
Location: 51041 - 56212 (-)
Gene ID: HRGMv2_2302_26_44
Type: pfam
Location: 56209 - 58473 (-)
Gene ID: HRGMv2_2302_26_45
Type: TC
Location: 58685 - 60316 (-)
Gene ID: HRGMv2_2302_26_46
Type: pfam
Location: 60446 - 61630 (-)
Gene ID: HRGMv2_2302_26_47
Type:
Location: 61646 - 61981 (-)
Gene ID: HRGMv2_2302_26_48
Type: CAZyme
Location: 62453 - 64411 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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