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Cluster: HRGMv2_2302_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_23 HRGMv2_2302_23_62 63543 64454 - GH43
CAZyme HRGMv2_2302_23 HRGMv2_2302_23_63 64473 66644 - GH105
NULL(UNKNOWN) HRGMv2_2302_23 HRGMv2_2302_23_64 66641 68611 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2302_23 HRGMv2_2302_23_65 68748 70418 - SBP_bac_1
TC HRGMv2_2302_23 HRGMv2_2302_23_66 70478 71362 - 3.A.1.1.29
TC HRGMv2_2302_23 HRGMv2_2302_23_67 71373 72287 - 3.A.1.1.10
TF HRGMv2_2302_23 HRGMv2_2302_23_68 72649 73674 + LacI
CAZyme HRGMv2_2302_23 HRGMv2_2302_23_69 73708 75771 + CBM67 | GH78
Gene ID: HRGMv2_2302_23_62
Type: CAZyme
Location: 63543 - 64454 (-)
Gene ID: HRGMv2_2302_23_63
Type: CAZyme
Location: 64473 - 66644 (-)
Gene ID: HRGMv2_2302_23_64
Type:
Location: 66641 - 68611 (-)
Gene ID: HRGMv2_2302_23_65
Type: STP
Location: 68748 - 70418 (-)
Gene ID: HRGMv2_2302_23_66
Type: TC
Location: 70478 - 71362 (-)
Gene ID: HRGMv2_2302_23_67
Type: TC
Location: 71373 - 72287 (-)
Gene ID: HRGMv2_2302_23_68
Type: TF
Location: 72649 - 73674 (+)
Gene ID: HRGMv2_2302_23_69
Type: CAZyme
Location: 73708 - 75771 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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