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Cluster: HRGMv2_2302_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_20 HRGMv2_2302_20_17 20432 21274 - 3.A.1.1.11
TC HRGMv2_2302_20 HRGMv2_2302_20_18 21289 22170 - 3.A.1.1.11
STP HRGMv2_2302_20 HRGMv2_2302_20_19 22301 23674 - SBP_bac_1
CAZyme HRGMv2_2302_20 HRGMv2_2302_20_20 23746 25995 - GH2
CAZyme HRGMv2_2302_20 HRGMv2_2302_20_21 26030 28273 - GH2
pfam HRGMv2_2302_20 HRGMv2_2302_20_22 28334 28777 - PCC
pfam HRGMv2_2302_20 HRGMv2_2302_20_23 29240 30454 - Acetyltransf_1 | Acetyltransf_3
TC HRGMv2_2302_20 HRGMv2_2302_20_24 30467 31798 - 2.A.66.1.37
Gene ID: HRGMv2_2302_20_17
Type: TC
Location: 20432 - 21274 (-)
Gene ID: HRGMv2_2302_20_18
Type: TC
Location: 21289 - 22170 (-)
Gene ID: HRGMv2_2302_20_19
Type: STP
Location: 22301 - 23674 (-)
Gene ID: HRGMv2_2302_20_20
Type: CAZyme
Location: 23746 - 25995 (-)
Gene ID: HRGMv2_2302_20_21
Type: CAZyme
Location: 26030 - 28273 (-)
Gene ID: HRGMv2_2302_20_22
Type: pfam
Location: 28334 - 28777 (-)
Gene ID: HRGMv2_2302_20_23
Type: pfam
Location: 29240 - 30454 (-)
Gene ID: HRGMv2_2302_20_24
Type: TC
Location: 30467 - 31798 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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