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Cluster: HRGMv2_2302_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_18 HRGMv2_2302_18_35 32705 34117 - 2.A.50.2.1
pfam HRGMv2_2302_18 HRGMv2_2302_18_36 34202 34924 - ThiF
CAZyme HRGMv2_2302_18 HRGMv2_2302_18_37 35084 38071 - GH2
pfam HRGMv2_2302_18 HRGMv2_2302_18_38 38144 39763 - DUF3502
TC HRGMv2_2302_18 HRGMv2_2302_18_39 39818 40759 - 3.A.1.1.29
TC HRGMv2_2302_18 HRGMv2_2302_18_40 40746 41690 - 3.A.1.1.10
TF HRGMv2_2302_18 HRGMv2_2302_18_41 41898 43001 + HTH_AraC | HTH_AraC
TC HRGMv2_2302_18 HRGMv2_2302_18_42 42998 44776 + 8.A.59.2.1
Gene ID: HRGMv2_2302_18_35
Type: TC
Location: 32705 - 34117 (-)
Gene ID: HRGMv2_2302_18_36
Type: pfam
Location: 34202 - 34924 (-)
Gene ID: HRGMv2_2302_18_37
Type: CAZyme
Location: 35084 - 38071 (-)
Gene ID: HRGMv2_2302_18_38
Type: pfam
Location: 38144 - 39763 (-)
Gene ID: HRGMv2_2302_18_39
Type: TC
Location: 39818 - 40759 (-)
Gene ID: HRGMv2_2302_18_40
Type: TC
Location: 40746 - 41690 (-)
Gene ID: HRGMv2_2302_18_41
Type: TF
Location: 41898 - 43001 (+)
Gene ID: HRGMv2_2302_18_42
Type: TC
Location: 42998 - 44776 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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