Cluster: HRGMv2_2302_CGC6
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2302
- CGC Family ID: CGCFAM_05320
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2302_1 | HRGMv2_2302_1_104 | 128491 | 130608 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_2302_1 | HRGMv2_2302_1_105 | 131077 | 131445 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2302_1 | HRGMv2_2302_1_106 | 131448 | 131786 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2302_1 | HRGMv2_2302_1_107 | 131930 | 132547 | - | 9.B.27.2.5 |
| TF | HRGMv2_2302_1 | HRGMv2_2302_1_108 | 132634 | 133551 | - | HTH_1 |
| TC | HRGMv2_2302_1 | HRGMv2_2302_1_109 | 133806 | 134951 | + | 2.A.120.1.5 |
| pfam | HRGMv2_2302_1 | HRGMv2_2302_1_110 | 134979 | 135824 | + | Aminotran_4 |
| CAZyme | HRGMv2_2302_1 | HRGMv2_2302_1_111 | 135973 | 136299 | - | CBM91 |
| CAZyme | HRGMv2_2302_1 | HRGMv2_2302_1_112 | 136296 | 137597 | - | GH43_12 |
| CAZyme | HRGMv2_2302_1 | HRGMv2_2302_1_113 | 137612 | 139126 | - | GH39 |
| TC | HRGMv2_2302_1 | HRGMv2_2302_1_114 | 139170 | 140051 | - | 3.A.1.1.9 |
| TC | HRGMv2_2302_1 | HRGMv2_2302_1_115 | 140065 | 140970 | - | 3.A.1.1.10 |
| TC | HRGMv2_2302_1 | HRGMv2_2302_1_116 | 141117 | 142754 | - | 3.A.1.1.10 |
| CAZyme | HRGMv2_2302_1 | HRGMv2_2302_1_117 | 142963 | 145578 | + | GH3 |
| CAZyme | HRGMv2_2302_1 | HRGMv2_2302_1_118 | 145575 | 147137 | + | GH35 |
Gene ID: HRGMv2_2302_1_104
Type: CAZyme
Location: 128491 - 130608 (-)
Type: CAZyme
Location: 128491 - 130608 (-)
Gene ID: HRGMv2_2302_1_105
Type:
Location: 131077 - 131445 (+)
Type:
Location: 131077 - 131445 (+)
Gene ID: HRGMv2_2302_1_106
Type:
Location: 131448 - 131786 (+)
Type:
Location: 131448 - 131786 (+)
Gene ID: HRGMv2_2302_1_107
Type: TC
Location: 131930 - 132547 (-)
Type: TC
Location: 131930 - 132547 (-)
Gene ID: HRGMv2_2302_1_108
Type: TF
Location: 132634 - 133551 (-)
Type: TF
Location: 132634 - 133551 (-)
Gene ID: HRGMv2_2302_1_109
Type: TC
Location: 133806 - 134951 (+)
Type: TC
Location: 133806 - 134951 (+)
Gene ID: HRGMv2_2302_1_110
Type: pfam
Location: 134979 - 135824 (+)
Type: pfam
Location: 134979 - 135824 (+)
Gene ID: HRGMv2_2302_1_111
Type: CAZyme
Location: 135973 - 136299 (-)
Type: CAZyme
Location: 135973 - 136299 (-)
Gene ID: HRGMv2_2302_1_112
Type: CAZyme
Location: 136296 - 137597 (-)
Type: CAZyme
Location: 136296 - 137597 (-)
Gene ID: HRGMv2_2302_1_113
Type: CAZyme
Location: 137612 - 139126 (-)
Type: CAZyme
Location: 137612 - 139126 (-)
Gene ID: HRGMv2_2302_1_114
Type: TC
Location: 139170 - 140051 (-)
Type: TC
Location: 139170 - 140051 (-)
Gene ID: HRGMv2_2302_1_115
Type: TC
Location: 140065 - 140970 (-)
Type: TC
Location: 140065 - 140970 (-)
Gene ID: HRGMv2_2302_1_116
Type: TC
Location: 141117 - 142754 (-)
Type: TC
Location: 141117 - 142754 (-)
Gene ID: HRGMv2_2302_1_117
Type: CAZyme
Location: 142963 - 145578 (+)
Type: CAZyme
Location: 142963 - 145578 (+)
Gene ID: HRGMv2_2302_1_118
Type: CAZyme
Location: 145575 - 147137 (+)
Type: CAZyme
Location: 145575 - 147137 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eisenbergiella
Species
Eisenbergiella sp003478085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.