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Cluster: HRGMv2_2302_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_17 HRGMv2_2302_17_69 78112 79089 + 8.A.5.1.6
pfam HRGMv2_2302_17 HRGMv2_2302_17_70 79175 80254 + BtrH_N | DUF4872
TC HRGMv2_2302_17 HRGMv2_2302_17_71 80402 81460 + 2.A.98.1.4
STP HRGMv2_2302_17 HRGMv2_2302_17_72 81858 83303 + SBP_bac_1
TC HRGMv2_2302_17 HRGMv2_2302_17_73 83376 84290 + 3.A.1.1.4
TC HRGMv2_2302_17 HRGMv2_2302_17_74 84292 85155 + 3.A.1.1.41
TF HRGMv2_2302_17 HRGMv2_2302_17_75 85162 86256 - HTH_AraC
CAZyme HRGMv2_2302_17 HRGMv2_2302_17_76 86462 88465 + GH120
Gene ID: HRGMv2_2302_17_69
Type: TC
Location: 78112 - 79089 (+)
Gene ID: HRGMv2_2302_17_70
Type: pfam
Location: 79175 - 80254 (+)
Gene ID: HRGMv2_2302_17_71
Type: TC
Location: 80402 - 81460 (+)
Gene ID: HRGMv2_2302_17_72
Type: STP
Location: 81858 - 83303 (+)
Gene ID: HRGMv2_2302_17_73
Type: TC
Location: 83376 - 84290 (+)
Gene ID: HRGMv2_2302_17_74
Type: TC
Location: 84292 - 85155 (+)
Gene ID: HRGMv2_2302_17_75
Type: TF
Location: 85162 - 86256 (-)
Gene ID: HRGMv2_2302_17_76
Type: CAZyme
Location: 86462 - 88465 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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