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Cluster: HRGMv2_2302_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_13 HRGMv2_2302_13_7 4962 5897 + 3.A.1.1.10
TC HRGMv2_2302_13 HRGMv2_2302_13_8 5897 6775 + 3.A.1.1.10
STP HRGMv2_2302_13 HRGMv2_2302_13_9 6929 8482 + SBP_bac_1
CAZyme HRGMv2_2302_13 HRGMv2_2302_13_10 8637 11186 + GH2
CAZyme HRGMv2_2302_13 HRGMv2_2302_13_11 11167 13038 + GH20
TF HRGMv2_2302_13 HRGMv2_2302_13_12 13066 14175 + GntR
CAZyme HRGMv2_2302_13 HRGMv2_2302_13_13 14180 15502 + GH125
Gene ID: HRGMv2_2302_13_7
Type: TC
Location: 4962 - 5897 (+)
Gene ID: HRGMv2_2302_13_8
Type: TC
Location: 5897 - 6775 (+)
Gene ID: HRGMv2_2302_13_9
Type: STP
Location: 6929 - 8482 (+)
Gene ID: HRGMv2_2302_13_10
Type: CAZyme
Location: 8637 - 11186 (+)
Gene ID: HRGMv2_2302_13_11
Type: CAZyme
Location: 11167 - 13038 (+)
Gene ID: HRGMv2_2302_13_12
Type: TF
Location: 13066 - 14175 (+)
Gene ID: HRGMv2_2302_13_13
Type: CAZyme
Location: 14180 - 15502 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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