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Cluster: HRGMv2_2302_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_10 HRGMv2_2302_10_49 51811 52788 + 3.A.1.1.29
TC HRGMv2_2302_10 HRGMv2_2302_10_50 52801 53700 + 3.A.1.1.29
TC HRGMv2_2302_10 HRGMv2_2302_10_51 53755 55368 + 3.A.1.1.29
CAZyme HRGMv2_2302_10 HRGMv2_2302_10_52 55423 57363 + GH36
CAZyme HRGMv2_2302_10 HRGMv2_2302_10_53 57971 60157 + GH13_11
TC HRGMv2_2302_10 HRGMv2_2302_10_54 60237 62351 - 3.D.1.4.1
TC HRGMv2_2302_10 HRGMv2_2302_10_55 62374 63852 - 3.D.1.4.3
TC HRGMv2_2302_10 HRGMv2_2302_10_56 63887 65371 - 3.D.1.4.3
TC HRGMv2_2302_10 HRGMv2_2302_10_57 65478 66971 - 3.D.1.4.1
pfam HRGMv2_2302_10 HRGMv2_2302_10_58 66972 67346 - Oxidored_q2
TC HRGMv2_2302_10 HRGMv2_2302_10_59 67348 68316 - 3.D.1.4.1
Gene ID: HRGMv2_2302_10_49
Type: TC
Location: 51811 - 52788 (+)
Gene ID: HRGMv2_2302_10_50
Type: TC
Location: 52801 - 53700 (+)
Gene ID: HRGMv2_2302_10_51
Type: TC
Location: 53755 - 55368 (+)
Gene ID: HRGMv2_2302_10_52
Type: CAZyme
Location: 55423 - 57363 (+)
Gene ID: HRGMv2_2302_10_53
Type: CAZyme
Location: 57971 - 60157 (+)
Gene ID: HRGMv2_2302_10_54
Type: TC
Location: 60237 - 62351 (-)
Gene ID: HRGMv2_2302_10_55
Type: TC
Location: 62374 - 63852 (-)
Gene ID: HRGMv2_2302_10_56
Type: TC
Location: 63887 - 65371 (-)
Gene ID: HRGMv2_2302_10_57
Type: TC
Location: 65478 - 66971 (-)
Gene ID: HRGMv2_2302_10_58
Type: pfam
Location: 66972 - 67346 (-)
Gene ID: HRGMv2_2302_10_59
Type: TC
Location: 67348 - 68316 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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