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Cluster: HRGMv2_2302_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_1 HRGMv2_2302_1_52 66544 67887 - GH29
TC HRGMv2_2302_1 HRGMv2_2302_1_53 67884 68789 - 3.A.1.1.29
TC HRGMv2_2302_1 HRGMv2_2302_1_54 68801 69733 - 3.A.1.1.10
STP HRGMv2_2302_1 HRGMv2_2302_1_55 69827 71530 - SBP_bac_1
peptidase HRGMv2_2302_1 HRGMv2_2302_1_56 71903 72835 + S33.UPW
CAZyme HRGMv2_2302_1 HRGMv2_2302_1_57 72976 76455 - CBM67 | GH78
TC HRGMv2_2302_1 HRGMv2_2302_1_58 76458 77345 - 3.A.1.1.29
TC HRGMv2_2302_1 HRGMv2_2302_1_59 77362 78309 - 3.A.1.1.9
Gene ID: HRGMv2_2302_1_52
Type: CAZyme
Location: 66544 - 67887 (-)
Gene ID: HRGMv2_2302_1_53
Type: TC
Location: 67884 - 68789 (-)
Gene ID: HRGMv2_2302_1_54
Type: TC
Location: 68801 - 69733 (-)
Gene ID: HRGMv2_2302_1_55
Type: STP
Location: 69827 - 71530 (-)
Gene ID: HRGMv2_2302_1_56
Type: peptidase
Location: 71903 - 72835 (+)
Gene ID: HRGMv2_2302_1_57
Type: CAZyme
Location: 72976 - 76455 (-)
Gene ID: HRGMv2_2302_1_58
Type: TC
Location: 76458 - 77345 (-)
Gene ID: HRGMv2_2302_1_59
Type: TC
Location: 77362 - 78309 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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