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Cluster: HRGMv2_2302_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_7 HRGMv2_2302_7_83 98663 100291 + 3.A.1.1.29
TC HRGMv2_2302_7 HRGMv2_2302_7_84 100380 101357 + 3.A.1.1.10
TC HRGMv2_2302_7 HRGMv2_2302_7_85 101368 102279 + 3.A.1.1.10
CAZyme HRGMv2_2302_7 HRGMv2_2302_7_86 102344 104476 + CBM67 | GH78
CAZyme HRGMv2_2302_7 HRGMv2_2302_7_87 104478 106760 + CBM67 | GH78
TF HRGMv2_2302_7 HRGMv2_2302_7_88 106835 109066 + HTH_AraC | HTH_AraC
peptidase HRGMv2_2302_7 HRGMv2_2302_7_89 109063 110277 + S12.UPW
CAZyme HRGMv2_2302_7 HRGMv2_2302_7_90 110329 113418 + GH38
TF HRGMv2_2302_7 HRGMv2_2302_7_91 113501 115777 - HTH_AraC
TC HRGMv2_2302_7 HRGMv2_2302_7_92 116083 116946 + 3.A.1.1.29
TC HRGMv2_2302_7 HRGMv2_2302_7_93 116940 117869 + 3.A.1.1.10
TC HRGMv2_2302_7 HRGMv2_2302_7_94 117932 119653 + 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_2302_7 HRGMv2_2302_7_95 119780 120484 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2302_7 HRGMv2_2302_7_96 120484 121737 + GH29
Gene ID: HRGMv2_2302_7_83
Type: TC
Location: 98663 - 100291 (+)
Gene ID: HRGMv2_2302_7_84
Type: TC
Location: 100380 - 101357 (+)
Gene ID: HRGMv2_2302_7_85
Type: TC
Location: 101368 - 102279 (+)
Gene ID: HRGMv2_2302_7_86
Type: CAZyme
Location: 102344 - 104476 (+)
Gene ID: HRGMv2_2302_7_87
Type: CAZyme
Location: 104478 - 106760 (+)
Gene ID: HRGMv2_2302_7_88
Type: TF
Location: 106835 - 109066 (+)
Gene ID: HRGMv2_2302_7_89
Type: peptidase
Location: 109063 - 110277 (+)
Gene ID: HRGMv2_2302_7_90
Type: CAZyme
Location: 110329 - 113418 (+)
Gene ID: HRGMv2_2302_7_91
Type: TF
Location: 113501 - 115777 (-)
Gene ID: HRGMv2_2302_7_92
Type: TC
Location: 116083 - 116946 (+)
Gene ID: HRGMv2_2302_7_93
Type: TC
Location: 116940 - 117869 (+)
Gene ID: HRGMv2_2302_7_94
Type: TC
Location: 117932 - 119653 (+)
Gene ID: HRGMv2_2302_7_95
Type:
Location: 119780 - 120484 (+)
Gene ID: HRGMv2_2302_7_96
Type: CAZyme
Location: 120484 - 121737 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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