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Cluster: HRGMv2_2302_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_7 HRGMv2_2302_7_15 18017 19435 + GH32
TC HRGMv2_2302_7 HRGMv2_2302_7_16 19455 20369 + 3.A.1.1.10
TC HRGMv2_2302_7 HRGMv2_2302_7_17 20418 21350 + 3.A.1.1.10
TC HRGMv2_2302_7 HRGMv2_2302_7_18 21388 23112 + 3.A.1.1.10
pfam HRGMv2_2302_7 HRGMv2_2302_7_19 23180 23914 - Acyltransferase
STP HRGMv2_2302_7 HRGMv2_2302_7_20 24185 25588 + SBP_bac_1
TC HRGMv2_2302_7 HRGMv2_2302_7_21 25665 26531 + 3.A.1.1.20
TC HRGMv2_2302_7 HRGMv2_2302_7_22 26531 27370 + 3.A.1.1.6
TC HRGMv2_2302_7 HRGMv2_2302_7_23 27374 29119 + 8.A.59.2.1
Gene ID: HRGMv2_2302_7_15
Type: CAZyme
Location: 18017 - 19435 (+)
Gene ID: HRGMv2_2302_7_16
Type: TC
Location: 19455 - 20369 (+)
Gene ID: HRGMv2_2302_7_17
Type: TC
Location: 20418 - 21350 (+)
Gene ID: HRGMv2_2302_7_18
Type: TC
Location: 21388 - 23112 (+)
Gene ID: HRGMv2_2302_7_19
Type: pfam
Location: 23180 - 23914 (-)
Gene ID: HRGMv2_2302_7_20
Type: STP
Location: 24185 - 25588 (+)
Gene ID: HRGMv2_2302_7_21
Type: TC
Location: 25665 - 26531 (+)
Gene ID: HRGMv2_2302_7_22
Type: TC
Location: 26531 - 27370 (+)
Gene ID: HRGMv2_2302_7_23
Type: TC
Location: 27374 - 29119 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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