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Cluster: HRGMv2_2302_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_6 HRGMv2_2302_6_84 96010 96702 + 2.A.78.1.1
TC HRGMv2_2302_6 HRGMv2_2302_6_85 96699 97025 + 2.A.78.1.1
pfam HRGMv2_2302_6 HRGMv2_2302_6_86 97162 97701 - Rubrerythrin | RUBY_RBDX
STP HRGMv2_2302_6 HRGMv2_2302_6_87 97757 99136 - Fer4
TC HRGMv2_2302_6 HRGMv2_2302_6_88 99530 101161 + 3.A.1.119.1
TC HRGMv2_2302_6 HRGMv2_2302_6_89 101257 102978 + 3.A.1.106.5
pfam HRGMv2_2302_6 HRGMv2_2302_6_90 103014 104069 - Methyltransf_5
NULL(UNKNOWN) HRGMv2_2302_6 HRGMv2_2302_6_91 104095 104244 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_6 HRGMv2_2302_6_92 104408 105232 - 3.A.1.1.36
TC HRGMv2_2302_6 HRGMv2_2302_6_93 105222 106127 - 3.A.1.1.11
STP HRGMv2_2302_6 HRGMv2_2302_6_94 106345 107706 - SBP_bac_1
CAZyme HRGMv2_2302_6 HRGMv2_2302_6_95 107808 109796 - GH31_7
Gene ID: HRGMv2_2302_6_84
Type: TC
Location: 96010 - 96702 (+)
Gene ID: HRGMv2_2302_6_85
Type: TC
Location: 96699 - 97025 (+)
Gene ID: HRGMv2_2302_6_86
Type: pfam
Location: 97162 - 97701 (-)
Gene ID: HRGMv2_2302_6_87
Type: STP
Location: 97757 - 99136 (-)
Gene ID: HRGMv2_2302_6_88
Type: TC
Location: 99530 - 101161 (+)
Gene ID: HRGMv2_2302_6_89
Type: TC
Location: 101257 - 102978 (+)
Gene ID: HRGMv2_2302_6_90
Type: pfam
Location: 103014 - 104069 (-)
Gene ID: HRGMv2_2302_6_91
Type:
Location: 104095 - 104244 (-)
Gene ID: HRGMv2_2302_6_92
Type: TC
Location: 104408 - 105232 (-)
Gene ID: HRGMv2_2302_6_93
Type: TC
Location: 105222 - 106127 (-)
Gene ID: HRGMv2_2302_6_94
Type: STP
Location: 106345 - 107706 (-)
Gene ID: HRGMv2_2302_6_95
Type: CAZyme
Location: 107808 - 109796 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2302_6_86 vegan > omnivore 1.68574 0.04809

🧭 Explore Read Mapping of CGC

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