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Cluster: HRGMv2_2302_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_5 HRGMv2_2302_5_77 84652 85548 + 3.A.1.1.20
TC HRGMv2_2302_5 HRGMv2_2302_5_78 85563 86438 + 3.A.1.1.20
TC HRGMv2_2302_5 HRGMv2_2302_5_79 86533 87870 + 3.A.1.1.26
CAZyme HRGMv2_2302_5 HRGMv2_2302_5_80 87972 88991 + GH76
CAZyme HRGMv2_2302_5 HRGMv2_2302_5_81 89013 91481 + GH38
CAZyme HRGMv2_2302_5 HRGMv2_2302_5_82 91522 92721 + GH76
TF HRGMv2_2302_5 HRGMv2_2302_5_83 92810 93925 + GntR
CAZyme HRGMv2_2302_5 HRGMv2_2302_5_84 94016 95305 + GH125
NULL(UNKNOWN) HRGMv2_2302_5 HRGMv2_2302_5_85 95684 96709 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_5 HRGMv2_2302_5_86 96730 97965 + 9.A.47.2.1
Gene ID: HRGMv2_2302_5_77
Type: TC
Location: 84652 - 85548 (+)
Gene ID: HRGMv2_2302_5_78
Type: TC
Location: 85563 - 86438 (+)
Gene ID: HRGMv2_2302_5_79
Type: TC
Location: 86533 - 87870 (+)
Gene ID: HRGMv2_2302_5_80
Type: CAZyme
Location: 87972 - 88991 (+)
Gene ID: HRGMv2_2302_5_81
Type: CAZyme
Location: 89013 - 91481 (+)
Gene ID: HRGMv2_2302_5_82
Type: CAZyme
Location: 91522 - 92721 (+)
Gene ID: HRGMv2_2302_5_83
Type: TF
Location: 92810 - 93925 (+)
Gene ID: HRGMv2_2302_5_84
Type: CAZyme
Location: 94016 - 95305 (+)
Gene ID: HRGMv2_2302_5_85
Type:
Location: 95684 - 96709 (+)
Gene ID: HRGMv2_2302_5_86
Type: TC
Location: 96730 - 97965 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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