dbCAN Logo

Cluster: HRGMv2_2302_CGC154

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_130 HRGMv2_2302_130_3 4266 5765 - GH51_1
TF HRGMv2_2302_130 HRGMv2_2302_130_4 5951 6760 + HTH_AraC
pfam HRGMv2_2302_130 HRGMv2_2302_130_5 6757 7179 - 4HBT | 4HBT_2
TC HRGMv2_2302_130 HRGMv2_2302_130_6 7293 8699 - 3.B.1.1.6
TC HRGMv2_2302_130 HRGMv2_2302_130_7 8755 9906 - 3.B.1.1.3
pfam HRGMv2_2302_130 HRGMv2_2302_130_8 9991 10374 - Biotin_lipoyl
pfam HRGMv2_2302_130 HRGMv2_2302_130_9 10404 11159 - OAD_gamma
TC HRGMv2_2302_130 HRGMv2_2302_130_10 11178 12197 - 3.B.1.1.5
Gene ID: HRGMv2_2302_130_3
Type: CAZyme
Location: 4266 - 5765 (-)
Gene ID: HRGMv2_2302_130_4
Type: TF
Location: 5951 - 6760 (+)
Gene ID: HRGMv2_2302_130_5
Type: pfam
Location: 6757 - 7179 (-)
Gene ID: HRGMv2_2302_130_6
Type: TC
Location: 7293 - 8699 (-)
Gene ID: HRGMv2_2302_130_7
Type: TC
Location: 8755 - 9906 (-)
Gene ID: HRGMv2_2302_130_8
Type: pfam
Location: 9991 - 10374 (-)
Gene ID: HRGMv2_2302_130_9
Type: pfam
Location: 10404 - 11159 (-)
Gene ID: HRGMv2_2302_130_10
Type: TC
Location: 11178 - 12197 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2302_130_8 vegetarian > omnivore 1.51019 0.01548
HRGMv2_2302_130_8 vegetarian > vegan 1.83935 0.00614

🧭 Explore Read Mapping of CGC

← Back to Cluster List