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Cluster: HRGMv2_2302_CGC153

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_113 HRGMv2_2302_113_7 7343 7717 + 1.E.14.1.17
TC HRGMv2_2302_113 HRGMv2_2302_113_8 7710 8390 + 2.A.122.1.4
CAZyme HRGMv2_2302_113 HRGMv2_2302_113_9 8393 10885 - GH2
TF HRGMv2_2302_113 HRGMv2_2302_113_10 11166 12089 + HTH_AraC
CAZyme HRGMv2_2302_113 HRGMv2_2302_113_11 12102 14171 + GH3
TC HRGMv2_2302_113 HRGMv2_2302_113_12 14210 15568 + 2.A.2.3.3
TC HRGMv2_2302_113 HRGMv2_2302_113_13 15927 16520 + 3.A.1.1.29
Gene ID: HRGMv2_2302_113_7
Type: TC
Location: 7343 - 7717 (+)
Gene ID: HRGMv2_2302_113_8
Type: TC
Location: 7710 - 8390 (+)
Gene ID: HRGMv2_2302_113_9
Type: CAZyme
Location: 8393 - 10885 (-)
Gene ID: HRGMv2_2302_113_10
Type: TF
Location: 11166 - 12089 (+)
Gene ID: HRGMv2_2302_113_11
Type: CAZyme
Location: 12102 - 14171 (+)
Gene ID: HRGMv2_2302_113_12
Type: TC
Location: 14210 - 15568 (+)
Gene ID: HRGMv2_2302_113_13
Type: TC
Location: 15927 - 16520 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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